Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold254G45234 Striga asiatica HOM05D002321 ORTHO05D006445 6.6e-148 527.3 262 100.0
SGA_v2.0_scaffold131G34422 Striga asiatica HOM05D002321 ORTHO05D006445 9.1e-73 277.7 253 61.7
Migut.B00717 Erythranthe guttata HOM05D002321 ORTHO05D006445 4.5e-72 275.4 253 60.9
Dinv29681 Davidia involucrata HOM05D002321 ORTHO05D006445 2.6e-67 259.6 254 57.5
CSS0017136 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 5.7e-67 258.5 256 59.0
unitig_26.g9009 Utricularia gibba HOM05D002321 ORTHO05D006445 1.2e-64 250.8 253 55.3
Cc02_g23720 Coffea canephora HOM05D002321 ORTHO05D006445 7.7e-64 248.1 253 55.7
CSS0022296 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D006445 2.9e-63 246.1 254 55.5
ECA238G2920 Erigeron canadensis HOM05D002321 ORTHO05D006445 5.5e-62 241.9 253 53.4
PGSC0003DMG400021663 Solanum tuberosum HOM05D002321 ORTHO05D006445 5.5e-62 241.9 254 54.7
Lj5A285T49 Lonicera japonica HOM05D002321 ORTHO05D006445 7.2e-62 241.5 253 53.4
Sopen10g004370 Solanum pennellii HOM05D002321 ORTHO05D006445 7.2e-62 241.5 256 54.7
Solyc10g008560.3 Solanum lycopersicum HOM05D002321 ORTHO05D006445 2.1e-61 240.0 256 54.3
Peaxi162Scf00000g00067 Petunia axillaris HOM05D002321 ORTHO05D006445 3.6e-61 239.2 254 53.5
Actinidia26198 Actinidia chinensis HOM05D002321 ORTHO05D006445 1.8e-60 236.9 253 53.0
Oeu016640.1 Olea europaea HOM05D002321 ORTHO05D006445 1.8e-60 236.9 239 56.9
CAN.G168.25 Capsicum annuum HOM05D002321 ORTHO05D006445 2.3e-60 236.5 254 52.8
Thecc.06G020000 Theobroma cacao HOM05D002321 ORTHO05D006445 8.8e-60 234.6 254 53.1
GSVIVG01023138001 Vitis vinifera HOM05D002321 ORTHO05D006445 1.2e-59 234.2 254 52.8
Hma1.2p1_0157F.1_g069140 Hydrangea macrophylla HOM05D002321 ORTHO05D006445 2.0e-59 233.4 254 52.0
Lsat_1_v5_gn_9_124960 Lactuca sativa HOM05D002321 ORTHO05D006445 2.0e-59 233.4 259 53.3
Dinv29637 Davidia involucrata HOM05D002321 ORTHO05D006445 7.5e-59 231.5 239 54.8
vmacro19825 Vaccinium macrocarpon HOM05D002321 ORTHO05D006445 7.5e-59 231.5 254 51.6
Manes.07G030900 Manihot esculenta HOM05D002321 ORTHO05D006445 2.2e-58 229.9 254 52.4
CiPaw.05G001300 Carya illinoinensis HOM05D002321 ORTHO05D006445 4.8e-58 228.8 255 52.5
Duzib160G0234 Durio zibethinus HOM05D002321 ORTHO05D006445 4.8e-58 228.8 254 52.4
QL02p103548 Quercus lobata HOM05D002321 ORTHO05D006445 4.8e-58 228.8 255 52.5
Duzib192G0835 Durio zibethinus HOM05D002321 ORTHO05D006445 6.3e-58 228.4 254 52.0
Potri.004G229500 Populus trichocarpa HOM05D002321 ORTHO05D006445 1.4e-57 227.3 254 53.1
PGR042G0050 Punica granatum HOM05D002321 ORTHO05D006445 1.4e-57 227.3 254 51.6
Haze_09974 Corylus avellana HOM05D002321 ORTHO05D006445 3.1e-57 226.1 256 52.3
Lj9A259T47 Lonicera japonica HOM05D002321 ORTHO05D006445 5.4e-57 225.3 243 51.4
TWI59G0552 Tripterygium wilfordii HOM05D002321 ORTHO05D006445 1.6e-56 223.8 254 51.2
TAR628G0856 Trochodendron aralioides HOM05D002321 ORTHO05D006445 2.0e-56 223.4 265 50.9
Cfa004434 Carpinus fangiana HOM05D002321 ORTHO05D006445 2.7e-56 223.0 256 52.0
Gohir.A03G081200 Gossypium hirsutum HOM05D002321 ORTHO05D006445 2.7e-56 223.0 253 52.6
QL02p065019 Quercus lobata HOM05D002321 ORTHO05D006445 3.5e-56 222.6 255 51.0
HanXRQChr09g0248771 Helianthus annuus HOM05D002321 ORTHO05D006445 4.5e-56 222.2 253 49.8
TAR381G0422 Trochodendron aralioides HOM05D002321 ORTHO05D006445 7.7e-56 221.5 265 50.9
TAR381G1352 Trochodendron aralioides HOM05D002321 ORTHO05D006445 7.7e-56 221.5 265 50.9
Nitab4.5_0010848g0010 Nicotiana tabacum HOM05D002321 ORTHO05D006445 1.0e-55 221.1 293 47.1
Gorai.005G119600 Gossypium raimondii HOM05D002321 ORTHO05D006445 1.7e-55 220.3 253 51.8
Aqoxy6G00020 Aquilegia oxysepala HOM05D002321 ORTHO05D006445 2.9e-55 219.5 263 50.2
Ciclev10000869m.g Citrus clementina HOM05D002321 ORTHO05D006445 6.6e-55 218.4 254 50.8
THA.LOC104809044 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 8.6e-55 218.0 253 49.8
unitig_749.g14114 Utricularia gibba HOM05D002321 ORTHO05D006445 1.5e-54 217.2 260 48.1
ClCG05G014590 Citrullus lanatus HOM05D002321 ORTHO05D006445 1.9e-54 216.9 253 50.2
Eucgr.G00067 Eucalyptus grandis HOM05D002321 ORTHO05D006445 2.5e-54 216.5 254 49.6
Sed0020041 Sechium edule HOM05D002321 ORTHO05D006445 2.5e-54 216.5 253 49.8
Sc03g0005760 Simmondsia chinensis HOM05D002321 ORTHO05D006445 2.5e-54 216.5 255 49.8
MBI03_g34265_MAGBIO Magnolia biondii HOM05D002321 ORTHO05D006445 4.2e-54 215.7 264 50.4
Lj4g0019033 Lotus japonicus HOM05D002321 ORTHO05D006445 5.5e-54 215.3 254 50.0
AT5G49820 Arabidopsis thaliana HOM05D002321 ORTHO05D006445 9.5e-54 214.5 253 49.0
THA.LOC104824539 Tarenaya hassleriana HOM05D002321 ORTHO05D006445 9.5e-54 214.5 253 50.2
MELO3C016450.2 Cucumis melo HOM05D002321 ORTHO05D006445 1.6e-53 213.8 255 49.8
Manes.10G106100 Manihot esculenta HOM05D002321 ORTHO05D006445 2.1e-53 213.4 256 50.4
BraA02t06346Z Brassica rapa HOM05D002321 ORTHO05D006445 2.8e-53 213.0 253 48.6
RcHm_v2.0_Chr7g0219391 Rosa chinensis HOM05D002321 ORTHO05D006445 3.6e-53 212.6 254 49.6
Atru.chr6.213 Acer truncatum HOM05D002321 ORTHO05D006445 4.7e-53 212.2 254 48.0
Carub.0008s0970 Capsella rubella HOM05D002321 ORTHO05D006445 4.7e-53 212.2 253 48.2
CANSAT01G1907 Cannabis sativa HOM05D002321 ORTHO05D006445 6.1e-53 211.8 255 49.8
A02p12920 Brassica napus HOM05D002321 ORTHO05D006445 8.0e-53 211.5 253 48.6
CsaV3_3G006710 Cucumis sativus L. HOM05D002321 ORTHO05D006445 8.0e-53 211.5 255 49.4
MD15G1443300 Malus domestica HOM05D002321 ORTHO05D006445 8.0e-53 211.5 255 49.4
Aa31sc221G80 Aethionema arabicum HOM05D002321 ORTHO05D006445 1.0e-52 211.1 260 48.5
AL8G23790 Arabidopsis lyrata HOM05D002321 ORTHO05D006445 1.4e-52 210.7 253 48.2
BcaB05g24065 Brassica carinata HOM05D002321 ORTHO05D006445 1.4e-52 210.7 253 48.2
Prupe.1G585900 Prunus persica HOM05D002321 ORTHO05D006445 1.4e-52 210.7 254 48.4
BcaB01g02869 Brassica carinata HOM05D002321 ORTHO05D006445 1.8e-52 210.3 253 49.0
BcaC03g14664 Brassica carinata HOM05D002321 ORTHO05D006445 2.3e-52 209.9 253 48.2
BolC2t08242H Brassica oleracea HOM05D002321 ORTHO05D006445 2.3e-52 209.9 253 48.2
Thhalv10013323m.g Eutrema salsugineum HOM05D002321 ORTHO05D006445 3.0e-52 209.5 253 48.6
FAN13G2899 Fragaria x ananassa HOM05D002321 ORTHO05D006445 3.0e-52 209.5 255 49.4
Peaxi162Scf00071g00002 Petunia axillaris HOM05D002321 ORTHO05D006445 3.0e-52 209.5 239 52.3
C02p20990 Brassica napus HOM05D002321 ORTHO05D006445 5.2e-52 208.8 253 48.2
Lalb_Chr12g0195871 Lupinus albus HOM05D002321 ORTHO05D006445 5.2e-52 208.8 254 49.2
CDE07G1618 Ceratophyllum demersum HOM05D002321 ORTHO05D006445 6.8e-52 208.4 255 49.0
FvH4_5g27690 Fragaria vesca HOM05D002321 ORTHO05D006445 8.9e-52 208.0 254 48.4
TPR.G5983 Trifolium pratense HOM05D002321 ORTHO05D006445 1.2e-51 207.6 254 49.6
FAN08G1447 Fragaria x ananassa HOM05D002321 ORTHO05D006445 2.0e-51 206.8 254 48.4
ATR1089G008 Amborella trichopoda HOM05D002321 ORTHO05D006445 4.4e-51 205.7 260 48.8
Glyma.07G272200 Glycine max HOM05D002321 ORTHO05D006445 2.2e-50 203.4 254 46.9
VMungo1215G1402 Vigna mungo HOM05D002321 ORTHO05D006445 2.2e-50 203.4 254 47.2
Rhsim05G0115000 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.8e-50 203.0 239 50.2
Sabra01G0174700 Salix brachista HOM05D002321 ORTHO05D006445 2.8e-50 203.0 239 51.5
PSO447G0115 Papaver somniferum HOM05D002321 ORTHO05D006445 3.7e-50 202.6 261 47.5
Psat4g002680 Pisum sativum HOM05D002321 ORTHO05D006445 3.7e-50 202.6 254 46.9
Zm00001eb288290 Zea mays HOM05D002321 ORTHO05D006445 3.7e-50 202.6 254 45.7
AUR62040128 Chenopodium quinoa HOM05D002321 ORTHO05D006445 4.9e-50 202.2 254 47.6
Medtr4g134590 Medicago truncatula HOM05D002321 ORTHO05D006445 4.9e-50 202.2 254 48.4
PSO210G3878 Papaver somniferum HOM05D002321 ORTHO05D006445 4.9e-50 202.2 261 47.5
EL10Ac6g13971 Beta vulgaris HOM05D002321 ORTHO05D006445 6.3e-50 201.8 256 48.4
Medtr4g077650 Medicago truncatula HOM05D002321 ORTHO05D006445 6.3e-50 201.8 254 48.0
Glyma.17G002100 Glycine max HOM05D002321 ORTHO05D006445 8.3e-50 201.4 254 46.9
MD08G1248500 Malus domestica HOM05D002321 ORTHO05D006445 8.3e-50 201.4 254 47.6
Phvul.003G091200 Phaseolus vulgaris HOM05D002321 ORTHO05D006445 1.1e-49 201.1 254 46.5
Os01g0886900 Oryza sativa ssp. japonica HOM05D002321 ORTHO05D006445 2.7e-48 196.4 253 45.1
Zm00001eb349160 Zea mays HOM05D002321 ORTHO05D006445 5.9e-48 195.3 254 44.1
Sed0026062 Sechium edule HOM05D002321 ORTHO05D006445 1.0e-47 194.5 280 43.6
Gohir.D02G105400 Gossypium hirsutum HOM05D002321 ORTHO05D006445 1.3e-47 194.1 238 49.6
Zm00001eb365980 Zea mays HOM05D002321 ORTHO05D006445 1.3e-47 194.1 256 44.1
Sp6g11260 Schrenkiella parvula HOM05D002321 ORTHO05D006445 1.2e-45 187.6 238 46.6
Nitab4.5_0000460g0050 Nicotiana tabacum HOM05D002321 ORTHO05D006445 2.1e-45 186.8 239 48.1
COL.COLO4_31117 Corchorus olitorius HOM05D002321 ORTHO05D006445 6.8e-44 181.8 221 49.3
HPP92_019419 Vanilla planifolia HOM05D002321 ORTHO05D006445 7.5e-43 178.3 261 41.0
Ca_13527_v3 Cicer arietinum L. HOM05D002321 ORTHO05D006445 2.9e-42 176.4 238 45.8
Nn5g27149 Nelumbo nucifera HOM05D002321 ORTHO05D006445 4.9e-42 175.6 201 50.7
SHI04996 Sapria himalayana HOM05D002321 ORTHO05D000001 9.2e-41 171.4 240 44.6
SEGI_38877 Sequoiadendron giganteum HOM05D002321 ORTHO05D006445 1.5e-38 164.1 261 37.5
Zm00001eb145400 Zea mays HOM05D002321 ORTHO05D006445 2.1e-37 160.2 256 39.8
FAN04G1883 Fragaria x ananassa HOM05D002321 ORTHO05D006445 1.7e-34 150.6 220 42.7
FAN18G0084 Fragaria x ananassa HOM05D002321 ORTHO05D006445 2.9e-34 149.8 230 40.9
ClCG10G007500 Citrullus lanatus HOM05D002321 ORTHO05D006445 5.4e-33 145.6 244 40.2
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 5.4e-33 145.6 222 42.3
Cpa.g.sc173.6 Carica papaya HOM05D002321 ORTHO05D006445 8.6e-31 138.3 220 41.4
Pp3c5_3000 Physcomitrium patens HOM05D002321 ORTHO05D006445 1.2e-29 134.4 253 35.6
Mapoly0083s0024 Marchantia polymorpha HOM05D002321 ORTHO05D006445 3.6e-29 132.9 261 33.0
MBI06_g43030_MAGBIO Magnolia biondii HOM05D002321 ORTHO05D006445 1.1e-25 121.3 212 40.1
SEGI_34248 Sequoiadendron giganteum HOM05D002321 ORTHO05D006445 4.6e-24 115.9 260 32.3
AagrBONN_evm.TU.Sc2ySwM_228.2021 Anthoceros agrestis HOM05D002321 ORTHO05D006445 1.1e-22 111.3 239 31.8
arahy.Tifrunner.gnm1.ann1.AGW9EK Arachis hypogaea HOM05D002321 ORTHO05D006445 4.3e-22 109.4 144 43.8
arahy.Tifrunner.gnm1.ann1.M3HJLJ Arachis hypogaea HOM05D002321 ORTHO05D006445 4.3e-22 109.4 144 43.8
CARHR258950 Cardamine hirsuta HOM05D002321 ORTHO05D006445 4.7e-21 105.9 92 59.8
SMO351G0153 Selaginella moellendorffii HOM05D002321 ORTHO05D006445 5.2e-20 102.4 256 30.5
AUR62042961 Chenopodium quinoa HOM05D002321 ORTHO05D006445 2.6e-19 100.1 60 80.0
AUR62042962 Chenopodium quinoa HOM05D002321 ORTHO05D006445 2.2e-18 97.1 127 45.7
Pp3c6_25980 Physcomitrium patens HOM05D002321 ORTHO05D006445 8.1e-13 78.6 67 58.2


User provided reference genes

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