Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 1.1e-223 779.6 392 100.0
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 2.0e-116 423.3 338 65.7
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 4.3e-111 405.6 352 62.2
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.0e-107 394.4 334 64.4
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 7.9e-105 384.8 348 57.8
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 6.7e-104 381.7 332 59.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.9e-103 380.2 338 59.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.3e-103 379.0 347 58.8
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 5.7e-103 378.6 345 58.6
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.3e-102 377.5 328 60.1
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 6.3e-102 375.2 326 60.4
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.8e-101 373.6 331 59.2
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 6.9e-101 371.7 331 58.3
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.5e-100 370.5 343 57.4
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.5e-100 370.5 343 57.4
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.5e-100 370.5 337 57.3
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.1e-98 364.4 334 58.4
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.9e-98 363.6 325 58.5
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 3.2e-98 362.8 329 58.1
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.2e-98 362.8 334 57.5
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 7.2e-98 361.7 324 57.1
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 7.2e-98 361.7 326 57.7
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 2.1e-97 360.1 330 56.7
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 2.1e-97 360.1 343 56.0
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 2.7e-97 359.8 323 57.9
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 1.8e-96 357.1 338 55.9
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.3e-96 356.7 339 55.5
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.1e-96 355.5 343 55.4
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 6.7e-96 355.1 336 56.8
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 2.0e-95 353.6 330 57.9
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 2.6e-95 353.2 326 56.1
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 3.3e-95 352.8 335 56.4
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 3.3e-95 352.8 312 59.3
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 7.4e-95 351.7 341 54.8
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 2.2e-94 350.1 336 55.7
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.1e-93 347.8 351 54.7
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 2.4e-93 346.7 322 57.1
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 2.4e-93 346.7 311 56.9
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 5.3e-93 345.5 311 57.9
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 6.9e-93 345.1 341 54.3
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.5e-92 344.0 326 56.4
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.5e-92 344.0 326 56.4
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 3.4e-92 342.8 342 53.5
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 4.5e-92 342.4 338 53.8
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 7.7e-92 341.7 327 55.7
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 2.9e-91 339.7 325 54.5
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.9e-91 339.7 357 53.5
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.8e-91 339.3 334 54.2
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.1e-90 337.8 303 57.4
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.1e-90 337.8 303 57.4
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 3.2e-90 336.3 303 57.1
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 3.2e-90 336.3 332 54.2
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.2e-89 334.3 331 53.5
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 2.7e-89 333.2 328 53.7
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 2.7e-89 333.2 326 54.6
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 3.6e-89 332.8 335 54.0
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 3.6e-89 332.8 335 54.0
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 3.6e-89 332.8 335 54.0
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 6.1e-89 332.0 303 57.4
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.5e-87 327.4 340 51.5
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.5e-87 327.4 328 53.7
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 4.4e-87 325.9 340 51.5
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.4e-87 325.9 329 55.3
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 3.7e-86 322.8 322 55.0
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.4e-85 320.9 314 54.5
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.4e-85 320.9 287 58.2
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 7.0e-85 318.5 347 52.7
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 7.7e-84 315.1 283 55.8
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 4.7e-81 305.8 302 52.0
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.0e-80 304.7 321 51.7
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 4.0e-80 302.8 310 52.9
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.2e-78 297.0 304 51.6
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.1e-77 294.7 277 55.2
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 2.4e-77 293.5 267 55.4
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 9.1e-77 291.6 283 55.1
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.7e-75 287.3 285 52.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 4.2e-74 282.7 281 54.1
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 3.6e-73 279.6 319 48.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 2.3e-72 276.9 276 54.7
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.7e-70 270.8 285 50.9
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.8e-69 267.3 311 47.6
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 5.4e-69 265.8 257 53.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 3.5e-68 263.1 254 52.0
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 5.5e-66 255.8 267 51.3
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 4.7e-65 252.7 331 41.7
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.3e-62 244.6 303 45.5
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 4.9e-62 242.7 307 47.2
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 4.9e-62 242.7 257 52.9
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.1e-61 239.6 337 41.5
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 7.0e-61 238.8 307 42.0
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.2e-60 238.0 271 48.3
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 1.3e-59 234.6 229 53.3
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.4e-56 224.6 304 40.5
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 7.5e-55 218.8 255 47.5
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.5e-50 204.5 243 43.6
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 4.3e-50 203.0 276 43.1
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.6e-49 201.1 276 41.3
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.1e-49 200.7 340 40.9
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.8e-48 197.6 135 68.9
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.9e-45 187.6 286 41.3
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.3e-43 181.4 144 61.8
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.7e-27 127.9 87 72.4
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.9e-27 126.7 87 71.3
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.9e-26 124.4 103 59.2
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 1.6e-25 121.3 86 74.4
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.7e-22 111.3 98 50.0
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 5.4e-21 106.3 152 46.7
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-19 101.3 121 45.5
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 3.3e-18 97.1 59 86.4
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 6.9e-16 89.4 56 76.8
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.6e-15 87.4 98 43.9
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 6.2e-09 66.2 75 45.3
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 2.4e-08 64.3 52 61.5
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 3.1e-08 63.9 47 70.2
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.7e-06 58.2 304 24.0


User provided reference genes

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