Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 3.4e-135 485.0 235 100.0
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 3.4e-95 352.1 246 72.8
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 4.3e-90 335.1 238 71.4
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 6.2e-89 331.3 227 72.7
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 6.2e-89 331.3 234 71.4
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.8e-88 329.7 226 72.6
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 1.8e-88 329.7 226 72.6
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 4.0e-88 328.6 226 72.1
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 5.3e-88 328.2 239 69.5
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 9.0e-88 327.4 230 72.6
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 2.0e-87 326.2 232 71.6
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 2.0e-87 326.2 230 72.6
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 5.8e-87 324.7 232 71.6
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 5.8e-87 324.7 232 71.1
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 2.2e-86 322.8 224 72.8
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.9e-86 322.4 233 70.0
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 3.8e-86 322.0 225 72.4
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 4.9e-86 321.6 231 69.3
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.1e-85 320.5 230 71.3
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 1.1e-85 320.5 239 67.4
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 1.1e-85 320.5 232 70.3
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 1.9e-85 319.7 230 71.3
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 2.4e-85 319.3 229 70.3
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 5.5e-85 318.2 232 68.5
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 5.5e-85 318.2 237 68.4
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 7.1e-85 317.8 237 69.2
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 9.3e-85 317.4 225 70.7
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.6e-84 316.6 226 71.2
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.7e-84 315.8 225 71.1
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 4.6e-84 315.1 239 65.7
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 7.9e-84 314.3 230 70.0
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 2.3e-83 312.8 229 68.1
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 3.0e-83 312.4 227 69.6
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 3.9e-83 312.0 237 67.9
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.9e-82 309.7 237 67.5
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.5e-82 309.3 237 67.1
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 3.3e-82 308.9 221 71.5
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 3.3e-82 308.9 229 67.7
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 4.3e-82 308.5 232 69.4
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 4.3e-82 308.5 230 67.8
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 4.3e-82 308.5 228 67.5
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 7.4e-82 307.8 233 68.7
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 7.4e-82 307.8 239 66.5
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 1.6e-81 306.6 220 69.1
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 3.7e-81 305.4 233 67.0
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 8.1e-81 304.3 236 67.8
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 1.8e-80 303.1 217 70.5
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.8e-80 303.1 227 67.4
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 3.1e-80 302.4 221 69.7
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 4.0e-80 302.0 243 65.4
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 4.0e-80 302.0 243 65.4
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.0e-80 302.0 227 67.4
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 6.9e-80 301.2 245 64.9
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.5e-79 300.1 227 67.8
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.5e-79 300.1 227 67.8
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.5e-79 300.1 232 67.2
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 2.6e-79 299.3 231 64.9
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 3.4e-79 298.9 242 68.6
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 4.5e-79 298.5 236 66.5
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.5e-79 298.5 239 66.1
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.3e-78 297.0 235 66.4
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.9e-78 295.8 221 68.8
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 2.9e-78 295.8 221 67.9
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 8.4e-78 294.3 222 69.4
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 4.2e-77 292.0 227 65.6
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.0e-75 285.8 227 64.8
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.9e-75 285.4 178 78.1
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 5.1e-75 285.0 224 63.8
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.1e-74 283.9 221 64.3
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 1.1e-74 283.9 256 62.1
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.5e-74 283.5 240 63.3
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.5e-74 283.5 240 63.3
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 5.7e-74 281.6 224 62.9
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 7.4e-74 281.2 231 61.0
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 6.3e-73 278.1 229 62.0
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 6.3e-73 278.1 229 63.3
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.4e-72 276.9 245 62.0
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 2.4e-72 276.2 245 62.0
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.0e-70 270.8 227 63.0
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 1.7e-70 270.0 226 63.3
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 2.7e-68 262.7 232 60.8
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 5.7e-66 255.0 194 68.0
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.1e-64 248.8 194 67.0
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 2.2e-62 243.0 140 79.3
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.3e-59 233.0 193 65.3
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.3e-58 229.2 242 54.1
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 5.7e-58 228.4 221 54.3
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.7e-54 216.9 212 50.9
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 9.7e-50 201.1 215 49.8
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 3.7e-49 199.1 221 53.4
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 7.7e-39 164.9 139 66.9
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.3e-38 164.1 147 59.9
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.7e-38 163.7 166 56.6
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 7.2e-37 158.3 238 42.0
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 4.0e-27 125.9 82 69.5
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 6.3e-25 118.6 217 31.3
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.5e-10 70.9 57 61.4
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.6e-07 60.8 110 42.7


User provided reference genes

Program Settings