Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 1.1e-90 336.7 177 100.0
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 1.0e-59 233.8 164 73.8
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 2.2e-46 189.5 170 60.6
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 3.5e-44 182.2 176 59.7
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 5.6e-42 174.9 164 59.1
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 4.8e-41 171.8 172 56.4
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 5.8e-39 164.9 174 53.4
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 7.6e-39 164.5 148 61.5
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 7.6e-39 164.5 175 53.7
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 3.8e-38 162.2 172 52.3
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 1.9e-37 159.8 163 57.1
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 4.2e-37 158.7 155 58.7
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 3.5e-36 155.6 157 54.8
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 4.6e-36 155.2 170 53.5
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 6.0e-36 154.8 159 52.8
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.0e-35 154.1 156 55.8
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 2.3e-35 152.9 161 54.7
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 5.1e-35 151.8 98 75.5
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 6.6e-35 151.4 156 53.8
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 8.7e-35 151.0 173 51.4
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 1.5e-34 150.2 161 53.4
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 1.5e-34 150.2 189 49.7
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 2.5e-34 149.4 185 49.2
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 2.5e-34 149.4 162 51.9
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.3e-34 148.7 166 51.2
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 7.3e-34 147.9 155 54.2
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 7.3e-34 147.9 156 52.6
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 9.6e-34 147.5 162 56.2
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 1.3e-33 147.1 158 52.5
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 1.6e-33 146.7 156 53.2
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.6e-33 146.7 165 49.1
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 3.6e-33 145.6 159 52.8
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 4.8e-33 145.2 158 52.5
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.8e-33 145.2 167 50.3
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 4.8e-33 145.2 167 50.3
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 4.8e-33 145.2 156 52.6
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 6.2e-33 144.8 161 50.9
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 8.1e-33 144.4 163 49.7
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 8.1e-33 144.4 96 70.8
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 8.1e-33 144.4 156 52.6
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.1e-32 144.1 166 50.6
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 1.1e-32 144.1 160 52.5
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 1.4e-32 143.7 173 48.6
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.4e-32 143.7 166 50.0
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.8e-32 143.3 188 44.7
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.4e-32 142.9 161 50.9
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 2.4e-32 142.9 93 74.2
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 3.1e-32 142.5 155 50.3
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.1e-32 142.5 167 49.1
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 4.0e-32 142.1 162 48.1
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 4.0e-32 142.1 166 49.4
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 5.3e-32 141.7 160 50.0
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 5.3e-32 141.7 165 50.9
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 6.9e-32 141.4 164 50.0
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.9e-32 141.4 170 49.4
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 6.9e-32 141.4 163 50.3
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 9.0e-32 141.0 166 47.0
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 9.0e-32 141.0 161 54.0
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 1.5e-31 140.2 160 48.8
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.0e-31 139.8 165 49.7
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 2.0e-31 139.8 144 55.6
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 3.4e-31 139.0 153 49.0
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 3.4e-31 139.0 162 49.4
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 3.4e-31 139.0 165 49.1
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 4.5e-31 138.7 165 47.3
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 5.8e-31 138.3 160 53.8
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 7.6e-31 137.9 112 62.5
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 7.6e-31 137.9 165 51.5
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 7.6e-31 137.9 90 75.6
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 7.6e-31 137.9 162 47.5
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 9.9e-31 137.5 150 50.0
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 9.9e-31 137.5 160 53.1
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 9.9e-31 137.5 160 53.1
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 3.8e-30 135.6 171 46.8
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 3.8e-30 135.6 91 71.4
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.8e-30 135.6 188 46.3
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 3.8e-30 135.6 164 48.2
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 4.9e-30 135.2 165 50.3
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 4.9e-30 135.2 91 68.1
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 6.4e-30 134.8 93 71.0
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 6.4e-30 134.8 92 70.7
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 8.4e-30 134.4 162 46.3
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 3.2e-29 132.5 147 54.4
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 4.2e-29 132.1 191 44.5
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 4.2e-29 132.1 148 49.3
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 5.4e-29 131.7 159 46.5
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 7.1e-29 131.3 89 71.9
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.6e-28 130.2 90 72.2
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 2.1e-28 129.8 162 48.1
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 7.9e-28 127.9 173 48.6
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 7.9e-28 127.9 141 51.8
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 6.7e-27 124.8 129 53.5
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 8.7e-27 124.4 193 40.9
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 1.1e-26 124.0 128 49.2
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 2.5e-26 122.9 97 64.9
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 9.6e-26 120.9 92 67.4
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.6e-25 120.2 91 62.6
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 2.1e-25 119.8 90 73.3
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.8e-25 118.6 145 46.9
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.8e-24 116.7 80 70.0
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.8e-24 116.7 124 49.2
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 6.9e-24 114.8 149 43.0
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 1.5e-23 113.6 148 42.6
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 2.0e-23 113.2 149 42.3
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 4.5e-23 112.1 147 48.3
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.0e-22 110.9 219 39.3
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 2.2e-22 109.8 122 51.6
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.4e-21 107.1 137 45.3
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 3.2e-21 105.9 147 42.2
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 3.5e-20 102.4 132 47.0
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.7e-19 98.2 160 42.5
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 1.4e-16 90.5 209 34.0
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 4.1e-16 89.0 114 44.7
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 9.0e-16 87.8 57 71.9
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 3.4e-15 85.9 111 40.5
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 4.2e-13 79.0 76 52.6
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 7.2e-13 78.2 112 42.0
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 6.1e-12 75.1 57 61.4
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.1e-10 70.9 110 44.5
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.4e-08 63.2 71 50.7
CSS0042485 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.3e-06 57.4 102 37.3


User provided reference genes

Program Settings