Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold253G45146 Striga asiatica HOM05D000003 ORTHO05D000004 6.9e-81 303.9 153 100.0
SGA_v2.0_scaffold113G31740 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-13 80.1 64 54.7
SGA_v2.0_scaffold9G04768 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-12 77.0 89 46.1
SGA_v2.0_scaffold409G51103 Striga asiatica HOM05D000003 ORTHO05D000006 1.8e-12 76.6 144 34.7
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-10 70.1 121 34.7
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-10 69.3 87 37.9
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-09 67.4 87 41.4
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-09 67.4 89 37.1
CANSAT56G1890 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-09 66.2 89 36.0
Aa31LG3G6650 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-09 65.9 87 37.9
Aa31sc1394G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-09 65.9 87 36.8
Aa31sc360G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-09 65.9 87 42.5
Aa31LG2G15580 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-09 65.1 87 40.2
Aa31sc594G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-08 63.9 87 39.1
Aa31sc734G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-08 63.9 87 40.2
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-08 63.5 87 37.9
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-08 63.5 87 39.1
CANSAT21G1076 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-08 63.2 116 31.0
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-08 63.2 113 31.0
Aa31sc773G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-08 62.0 86 39.5
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-08 62.0 89 33.7
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 6.0e-08 61.6 87 37.9
BolC8t48059H Brassica oleracea HOM05D000003 ORTHO05D000004 7.8e-08 61.2 87 36.8
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 7.8e-08 61.2 89 37.1
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-07 60.8 146 28.1
CANSAT80G0163 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-07 60.5 123 31.7
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 60.1 87 33.3
Aa31LG8G12080 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 60.1 90 31.1
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-07 60.1 113 31.0
CANSAT35G1728 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-07 60.1 148 29.1
SGA_v2.0_scaffold301G47800 Striga asiatica HOM05D000003 ORTHO05D000006 1.7e-07 60.1 138 31.2
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.0e-07 59.3 87 36.8
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-07 58.9 207 25.1
CANSAT56G1157 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-07 58.5 149 29.5
RcHm_v2.0_Chr2g0136131 Rosa chinensis HOM05D000003 ORTHO05D000006 5.1e-07 58.5 91 36.3
TAR682G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 5.1e-07 58.5 87 35.6
CANSAT35G1735 Cannabis sativa HOM05D000003 ORTHO05D000004 6.6e-07 58.2 149 29.5
SGA_v2.0_scaffold55G19740 Striga asiatica HOM05D000003 ORTHO05D000004 6.6e-07 58.2 88 33.0
SGA_v2.0_scaffold56G19930 Striga asiatica HOM05D000003 ORTHO05D000006 6.6e-07 58.2 140 30.7
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-07 57.8 87 32.2
Lj2g0023446 Lotus japonicus HOM05D000003 ORTHO05D000004 8.6e-07 57.8 92 30.4
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 8.6e-07 57.8 145 28.3
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.4 166 27.1
QL05p016288 Quercus lobata HOM05D001961 ORTHO05D002286 1.1e-06 57.4 89 31.5
QL05p056608 Quercus lobata HOM05D000003 ORTHO05D000006 1.1e-06 57.4 89 34.8
CANSAT64G2432 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-06 57.0 112 33.9
FvH4_1g26332 Fragaria vesca HOM05D000003 ORTHO05D000004 1.5e-06 57.0 88 35.2
RhsimUnG0247100 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-06 57.0 87 34.5
Atru.chr4.3089 Acer truncatum HOM05D000003 ORTHO05D000126 1.9e-06 56.6 91 33.0
Aqoxy7G02210 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-06 56.6 144 30.6
Aa31sc31G40 Aethionema arabicum HOM05D000003 ORTHO05D000411 2.5e-06 56.2 86 32.6
Atru.chr3.2165 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 148 34.5
Aa31LG6G11540 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 87 31.0
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-06 55.8 87 36.8
CANSAT11G0650 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.8 86 40.7
CANSAT21G1152 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-06 55.8 126 28.6
Ah.01g015670 Amaranthus hybridus HOM05D000003 ORTHO05D000004 4.3e-06 55.5 90 35.6
CANSAT54G0843 Cannabis sativa HOM05D000003 ORTHO05D000006 4.3e-06 55.5 95 33.7
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.6e-06 55.1 85 29.4
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 91 31.9
Aa31sc248G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.6e-06 55.1 80 37.5
CANSAT01G2780 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 55.1 122 27.0
CANSAT54G2709 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-06 55.1 91 33.0
SGA_v2.0_scaffold76G25127 Striga asiatica HOM05D000003 ORTHO05D000004 5.6e-06 55.1 87 36.8
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 54.7 107 30.8
CANSAT11G2283 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 54.7 120 25.8
CANSAT78G0730 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-06 54.7 116 31.0
Rhsim01G0140300 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.3e-06 54.7 91 36.3
TPR.G18502 Trifolium pratense HOM05D000003 ORTHO05D000006 7.3e-06 54.7 89 34.8
Aa31sc25G170 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.6e-06 54.3 87 33.3
SEGI_27873 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 9.6e-06 54.3 93 31.2
TAR355G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 9.6e-06 54.3 87 31.0


User provided reference genes

Program Settings