Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold253G45145 Striga asiatica HOM05D039416 ORTHO05D000126 4.1e-190 667.9 347 100.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 9.1e-20 102.1 190 30.5
SGA_v2.0_scaffold78G25389 Striga asiatica HOM05D002880 ORTHO05D003450 1.3e-18 98.2 100 52.0
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 4.7e-16 89.7 366 29.5
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 7.4e-14 82.4 147 30.6
Nitab4.5_0001243g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.3e-13 81.6 212 27.4
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 1.7e-13 81.3 149 30.2
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-11 74.7 235 27.7
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 2.9e-10 70.5 144 29.2
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 3.8e-10 70.1 188 29.3
SGA_v2.0_scaffold251G45062 Striga asiatica HOM05D039416 ORTHO05D401861 8.5e-10 68.9 107 33.6
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.1e-09 68.6 95 33.7
SGA_v2.0_scaffold179G39544 Striga asiatica HOM05D039416 ORTHO05D000004 2.1e-08 64.3 84 36.9
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 4.7e-08 63.2 86 32.6
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 8.0e-08 62.4 297 23.9
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-07 61.6 90 32.2
Dinv13290 Davidia involucrata HOM05D000003 ORTHO05D000126 1.8e-07 61.2 90 35.6
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-07 61.2 87 29.9
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.0e-07 60.5 90 35.6
Dinv24368 Davidia involucrata HOM05D000003 ORTHO05D000126 4.0e-07 60.1 90 33.3
Rhsim04G0176200 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.2e-07 59.7 99 32.3
Nitab4.5_0003244g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.7e-07 59.3 75 36.0
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.7e-07 59.3 90 32.2
Dinv34280 Davidia involucrata HOM05D000003 ORTHO05D000126 1.1e-06 58.5 90 33.3
Dinv09809 Davidia involucrata HOM05D000003 ORTHO05D000126 1.5e-06 58.2 90 32.2
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 1.5e-06 58.2 90 33.3
Dinv31372 Davidia involucrata HOM05D000003 ORTHO05D000126 1.5e-06 58.2 90 33.3
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.5e-06 58.2 90 33.3
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-06 57.0 117 32.5
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 7.5e-06 55.8 90 32.2
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 7.5e-06 55.8 90 32.2


User provided reference genes

Program Settings