Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 1.3e-73 279.6 138 100.0
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.3e-51 205.7 133 73.7
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 7.7e-47 190.7 130 71.5
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 3.2e-45 185.3 118 75.4
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 4.2e-45 184.9 130 67.7
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 7.2e-45 184.1 129 67.4
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.2e-44 183.3 130 70.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 6.1e-44 181.0 129 67.4
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 6.1e-44 181.0 129 67.4
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.0e-43 180.3 123 66.7
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.0e-43 180.3 139 60.4
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.0e-43 180.3 129 67.4
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.4e-43 179.9 131 65.6
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.8e-43 179.5 130 68.5
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 4.0e-43 178.3 129 66.7
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.5e-42 176.4 137 66.4
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 1.5e-42 176.4 130 68.5
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.0e-42 176.0 129 65.1
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 2.6e-42 175.6 130 62.3
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 3.4e-42 175.3 130 64.6
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 5.7e-42 174.5 129 65.9
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.3e-41 173.3 157 58.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.2e-41 172.6 129 62.0
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 2.2e-41 172.6 106 73.6
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 2.8e-41 172.2 130 64.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 3.7e-41 171.8 138 60.1
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 6.3e-41 171.0 106 72.6
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 8.3e-41 170.6 110 72.7
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 8.3e-41 170.6 143 62.2
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 8.3e-41 170.6 131 63.4
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.4e-40 169.9 112 73.2
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.4e-40 169.9 119 68.1
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.4e-40 169.9 117 68.4
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.8e-40 169.5 130 62.3
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.1e-40 168.3 130 63.1
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 4.1e-40 168.3 130 62.3
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 5.4e-40 167.9 131 64.1
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 5.4e-40 167.9 113 70.8
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 7.0e-40 167.5 132 62.1
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 7.0e-40 167.5 104 73.1
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.2e-39 166.8 130 63.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.6e-39 166.4 102 72.5
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 2.0e-39 166.0 132 64.4
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.7e-39 165.6 143 58.0
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.7e-39 165.6 106 69.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 3.5e-39 165.2 113 70.8
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 3.5e-39 165.2 130 62.3
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 4.5e-39 164.9 102 73.5
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 4.5e-39 164.9 102 75.5
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 7.7e-39 164.1 105 71.4
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 7.7e-39 164.1 106 70.8
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 7.7e-39 164.1 116 68.1
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.0e-38 163.7 129 62.0
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.0e-38 163.7 113 69.0
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.0e-38 163.7 100 73.0
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.0e-38 163.7 104 71.2
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.3e-38 163.3 115 66.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 1.7e-38 162.9 131 60.3
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 2.2e-38 162.5 114 68.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.2e-38 162.5 102 72.5
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.2e-38 162.5 102 72.5
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 2.9e-38 162.2 129 59.7
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 3.8e-38 161.8 123 61.0
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 5.0e-38 161.4 129 61.2
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.5e-38 161.0 114 67.5
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 6.5e-38 161.0 104 71.2
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 8.5e-38 160.6 119 61.3
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.1e-37 160.2 129 58.9
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.1e-37 160.2 106 67.0
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.9e-37 159.5 131 61.1
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 2.5e-37 159.1 122 65.6
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 2.5e-37 159.1 101 70.3
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 2.5e-37 159.1 116 65.5
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 4.2e-37 158.3 116 64.7
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 4.2e-37 158.3 116 65.5
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.5e-37 157.9 121 64.5
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 7.2e-37 157.5 111 66.7
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 9.4e-37 157.1 125 63.2
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.6e-36 156.4 112 63.4
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.6e-36 156.4 124 62.9
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.6e-36 156.4 124 62.9
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.6e-36 156.4 124 62.9
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 2.1e-36 156.0 102 70.6
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 2.1e-36 156.0 113 67.3
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.1e-36 156.0 109 64.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 3.6e-36 155.2 117 61.5
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.6e-36 155.2 116 63.8
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 4.7e-36 154.8 107 65.4
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 6.1e-36 154.5 107 66.4
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 6.1e-36 154.5 115 63.5
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.8e-35 152.9 94 74.5
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 3.0e-35 152.1 134 55.2
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 6.8e-35 151.0 121 62.0
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 1.5e-34 149.8 158 50.0
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 4.4e-34 148.3 106 63.2
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 5.7e-34 147.9 106 61.3
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 9.8e-34 147.1 204 43.6
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.3e-33 146.7 136 54.4
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 4.9e-33 144.8 102 68.6
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.4e-32 143.3 147 53.1
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.7e-30 136.3 108 62.0
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 3.8e-30 135.2 81 76.5
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 6.6e-30 134.4 83 74.7
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 4.2e-29 131.7 168 43.5
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 3.6e-28 128.6 82 73.2
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.2e-26 123.6 118 54.2
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 7.5e-26 120.9 121 53.7
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 2.4e-24 115.9 75 69.3
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.2e-24 115.5 82 68.3
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.9e-22 108.6 63 81.0
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.5e-21 105.9 104 45.2
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 7.3e-21 104.4 109 50.5
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 9.5e-21 104.0 69 71.0
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 2.1e-20 102.8 64 71.9
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.8e-20 102.4 63 74.6
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 3.1e-19 99.0 68 67.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 5.2e-19 98.2 86 54.7
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.1e-16 90.5 106 41.5
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.1e-13 80.5 99 38.4
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.5e-13 80.1 95 45.3
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.9e-13 79.7 63 60.3
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 3.3e-13 79.0 65 56.9
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.1e-12 76.3 57 63.2
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 2.8e-12 75.9 96 35.4
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.8e-11 73.2 90 34.4


User provided reference genes

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