Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold250G44986 Striga asiatica HOM05D005616 ORTHO05D403636 5.8e-61 237.3 112 100.0
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 2.4e-38 162.2 127 67.7
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.3e-07 60.1 33 75.8
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 1.3e-07 60.1 33 75.8
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.8e-06 56.2 33 69.7
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 3.1e-06 55.5 33 69.7
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 4.1e-06 55.1 32 71.9
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.1e-06 55.1 33 66.7
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 4.1e-06 55.1 33 66.7
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 7.0e-06 54.3 32 68.8
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 7.0e-06 54.3 32 68.8
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 9.1e-06 53.9 33 63.6
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 9.1e-06 53.9 33 63.6
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 9.1e-06 53.9 32 68.8
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 9.1e-06 53.9 33 66.7
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 9.1e-06 53.9 33 66.7


User provided reference genes

Program Settings