Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10705 Striga asiatica HOM05D018457 ORTHO05D000045 9.0e-159 563.5 285 100.0
SGA_v2.0_scaffold32G13337 Striga asiatica HOM05D018457 ORTHO05D000045 1.8e-154 549.3 278 100.0
SGA_v2.0_scaffold4G02282 Striga asiatica HOM05D018457 ORTHO05D000045 8.7e-45 184.9 173 63.6
SGA_v2.0_scaffold160G37714 Striga asiatica HOM05D018457 ORTHO05D000045 1.8e-37 160.6 272 39.0
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 2.4e-26 123.6 275 35.3
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 6.5e-24 115.5 251 32.3
SGA_v2.0_scaffold1G00565 Striga asiatica HOM05D018457 ORTHO05D000045 4.7e-22 109.4 224 36.6
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.4e-20 102.1 233 30.5
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-19 100.5 233 30.0
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 2.2e-19 100.5 322 25.8
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-19 100.1 306 27.5
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.4e-18 97.1 194 31.4
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 7.7e-17 92.0 258 29.1
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 1.3e-16 91.3 67 61.2
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-16 89.7 67 53.7
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-16 89.7 70 52.9
SGA_v2.0_scaffold87G27150 Striga asiatica HOM05D018457 ORTHO05D000045 6.5e-16 89.0 110 42.7
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 9.4e-15 85.1 68 58.8
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.7e-14 83.6 183 26.8
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-12 77.8 161 28.0
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 4.8e-11 72.8 70 47.1
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 8.3e-11 72.0 243 24.7
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 1.4e-10 71.2 208 22.6
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.4e-10 71.2 66 39.4
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 5.3e-10 69.3 74 41.9
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.0e-10 68.9 77 37.7
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.0e-10 68.9 77 37.7
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.1e-10 68.6 247 24.3
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-09 68.2 77 37.7
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 1.6e-09 67.8 204 22.5
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-09 67.4 77 37.7
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-09 67.4 77 37.7
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-09 67.4 77 37.7
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-09 67.4 66 42.4
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 5.9e-09 65.9 65 46.2
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 5.9e-09 65.9 61 47.5
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 7.7e-09 65.5 68 38.2
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 7.7e-09 65.5 61 49.2
Oeu050616.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-08 64.7 65 43.1
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 1.7e-08 64.3 69 36.2
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-08 64.3 67 46.3
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-08 64.3 86 37.2
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 2.2e-08 63.9 185 28.1
CiPaw.01G147400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.2e-08 63.9 69 39.1
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.2e-08 63.9 67 41.8
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.2e-08 63.9 98 36.7
Oeu037905.1 Olea europaea HOM05D000096 ORTHO05D000045 2.2e-08 63.9 67 43.3
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-08 63.5 72 38.9
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-08 63.5 72 38.9
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-08 63.5 72 38.9
Oeu017669.1 Olea europaea HOM05D000096 ORTHO05D000045 2.9e-08 63.5 67 41.8
Oeu005211.1 Olea europaea HOM05D000423 ORTHO05D000284 3.8e-08 63.2 66 40.9
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 3.8e-08 63.2 71 40.8
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 5.0e-08 62.8 69 42.0
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 6.5e-08 62.4 64 42.2
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 6.5e-08 62.4 164 24.4
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 6.5e-08 62.4 68 42.6
Oeu046629.1 Olea europaea HOM05D000096 ORTHO05D000045 6.5e-08 62.4 65 43.1
EL10Ac5g11745 Beta vulgaris HOM05D000096 ORTHO05D000045 8.5e-08 62.0 69 42.0
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 8.5e-08 62.0 71 39.4
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 8.5e-08 62.0 71 39.4
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 8.5e-08 62.0 76 39.5
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-07 61.2 65 40.0
EL10Ac1g02310 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-07 60.8 69 40.6
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-07 60.8 72 38.9
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-07 60.8 75 36.0
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-07 60.8 65 40.0
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-07 60.5 65 40.0
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-07 60.5 71 35.2
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 3.2e-07 60.1 200 21.0
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 3.2e-07 60.1 71 39.4
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 3.2e-07 60.1 65 38.5
Oeu051178.1 Olea europaea HOM05D000096 ORTHO05D000045 3.2e-07 60.1 65 40.0
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 4.2e-07 59.7 200 23.0
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 4.2e-07 59.7 200 23.0
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 4.2e-07 59.7 200 23.0
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 4.2e-07 59.7 72 40.3
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 4.2e-07 59.7 72 34.7
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 4.2e-07 59.7 77 32.5
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 5.5e-07 59.3 69 40.6
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 5.5e-07 59.3 66 36.4
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 5.5e-07 59.3 72 34.7
CAN.G97.48 Capsicum annuum HOM05D000096 ORTHO05D000045 5.5e-07 59.3 61 42.6
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 5.5e-07 59.3 65 40.0
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 7.2e-07 58.9 65 40.0
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 9.4e-07 58.5 65 38.5
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 9.4e-07 58.5 67 38.8
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-06 58.2 192 23.4
Oeu057797.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-06 58.2 71 38.0
SGA_v2.0_scaffold260G45870 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-06 58.2 196 27.0
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-06 57.4 65 38.5
CAN.G297.5 Capsicum annuum HOM05D000096 ORTHO05D000045 2.1e-06 57.4 65 43.1
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.1e-06 57.4 72 37.5
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 2.1e-06 57.4 65 35.4
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-06 57.0 67 34.3
CANSAT64G0254 Cannabis sativa HOM05D000096 ORTHO05D000045 3.6e-06 56.6 66 34.8
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.6e-06 56.6 66 39.4
CiPaw.10G073400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.6e-06 56.6 66 39.4
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.6e-06 56.6 72 37.5
Oeu049649.1 Olea europaea HOM05D000096 ORTHO05D000045 3.6e-06 56.6 69 37.7
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 4.7e-06 56.2 94 33.0
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 4.7e-06 56.2 65 36.9
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.7e-06 56.2 80 30.0
Migut.M00581 Erythranthe guttata HOM05D000096 ORTHO05D000045 4.7e-06 56.2 149 31.5
PGSC0003DMG400042276 Solanum tuberosum HOM05D000096 ORTHO05D000045 4.7e-06 56.2 68 36.8
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 4.7e-06 56.2 76 32.9
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 6.1e-06 55.8 78 34.6
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 6.1e-06 55.8 65 36.9
Oeu053705.1 Olea europaea HOM05D001043 ORTHO05D001555 8.0e-06 55.5 69 33.3
Zm00001eb009210 Zea mays HOM05D008270 ORTHO05D000045 8.0e-06 55.5 76 30.3


User provided reference genes

Program Settings