Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.2e-74 283.1 149 100.0
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 2.1e-34 149.4 148 60.1
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.6e-32 142.5 137 62.0
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 9.9e-32 140.6 140 57.9
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 6.4e-31 137.9 134 61.2
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 8.4e-31 137.5 143 58.7
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.9e-30 136.3 137 56.9
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 3.2e-30 135.6 142 57.7
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 3.5e-29 132.1 138 58.7
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.5e-29 132.1 153 52.3
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.0e-28 130.6 118 59.3
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.5e-27 126.7 163 51.5
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 3.3e-27 125.6 132 56.1
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 1.6e-26 123.2 157 52.9
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.1e-26 122.9 158 52.5
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.8e-26 122.5 104 62.5
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 2.8e-26 122.5 153 50.3
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.8e-26 122.5 143 55.2
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 3.6e-26 122.1 132 53.0
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 6.2e-26 121.3 147 51.7
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 6.2e-26 121.3 157 52.2
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 8.1e-26 120.9 157 52.9
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.1e-25 120.6 139 53.2
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.8e-25 119.8 136 55.1
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 2.4e-25 119.4 141 53.9
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 3.1e-25 119.0 139 54.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 4.0e-25 118.6 184 46.7
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 5.2e-25 118.2 138 54.3
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 6.9e-25 117.9 110 59.1
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 6.9e-25 117.9 133 52.6
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 6.9e-25 117.9 133 56.4
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 9.0e-25 117.5 136 52.9
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.5e-24 116.7 98 62.2
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 2.0e-24 116.3 132 51.5
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 2.0e-24 116.3 131 57.3
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 3.4e-24 115.5 135 51.1
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.4e-24 115.5 97 63.9
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 5.8e-24 114.8 137 52.6
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 9.9e-24 114.0 145 50.3
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 9.9e-24 114.0 131 54.2
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 1.3e-23 113.6 146 50.7
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.7e-23 113.2 145 53.8
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.2e-23 112.8 137 51.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 2.9e-23 112.5 154 45.5
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 3.8e-23 112.1 115 53.0
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 4.9e-23 111.7 99 61.6
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 8.4e-23 110.9 127 55.9
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 5.4e-22 108.2 139 51.1
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.1e-22 107.8 138 50.7
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 9.3e-22 107.5 133 52.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.2e-21 107.1 139 53.2
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.6e-21 106.7 138 48.6
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 2.1e-21 106.3 135 51.1
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 2.7e-21 105.9 143 48.3
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 4.6e-21 105.1 100 59.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 7.8e-21 104.4 112 55.4
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 7.8e-21 104.4 133 52.6
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 1.3e-20 103.6 156 44.9
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.3e-20 102.8 144 46.5
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 5.1e-20 101.7 96 60.4
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 6.6e-20 101.3 130 48.5
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 8.7e-20 100.9 123 52.8
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.1e-19 100.5 92 59.8
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.5e-19 99.4 113 55.8
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 7.3e-19 97.8 112 55.4
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 7.3e-19 97.8 112 55.4
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 9.6e-19 97.4 141 46.1
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 1.6e-18 96.7 127 46.5
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 2.1e-18 96.3 133 47.4
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 2.1e-18 96.3 94 57.4
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 3.1e-17 92.4 132 46.2
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.0e-17 92.0 132 46.2
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 1.7e-15 86.7 131 45.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 1.7e-15 86.7 101 51.5
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 3.2e-14 82.4 100 50.0
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 9.3e-14 80.9 102 51.0
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.2e-13 80.5 100 49.0
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.2e-13 80.5 102 49.0
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 2.1e-13 79.7 103 50.5
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 2.7e-13 79.3 100 49.0
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.7e-13 79.3 132 42.4
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 3.5e-13 79.0 90 52.2
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 6.0e-13 78.2 137 41.6
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 2.3e-12 76.3 132 41.7
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 3.0e-12 75.9 132 38.6
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 6.7e-12 74.7 186 34.4
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 6.7e-12 74.7 186 34.4
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.3e-10 70.5 131 39.7
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 2.8e-10 69.3 107 43.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 6.2e-10 68.2 107 41.1
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 1.4e-09 67.0 105 41.0
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.4e-09 67.0 128 38.3
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.8e-09 66.6 106 43.4
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 9.0e-09 64.3 141 36.2
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 9.0e-09 64.3 135 45.2
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 1.2e-08 63.9 139 35.3
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 2.6e-08 62.8 123 37.4
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 1.3e-07 60.5 102 41.2
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 1.3e-07 60.5 44 56.8
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.7e-07 60.1 98 36.7
SHI04088 Sapria himalayana HOM05D007629 ORTHO05D009511 8.4e-07 57.8 123 35.0
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 4.2e-06 55.5 98 44.9


User provided reference genes

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