Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.2e-219 766.1 380 100.0
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 3.2e-175 618.6 385 80.8
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 5.4e-175 617.8 385 80.8
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.1e-170 603.6 382 77.7
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 3.2e-167 592.0 383 77.3
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.2e-161 573.5 390 74.1
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.5e-161 573.2 386 75.9
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.4e-159 566.6 389 73.3
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 3.5e-158 562.0 386 73.8
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 7.8e-158 560.8 400 72.2
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 2.3e-157 559.3 386 73.1
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 6.6e-157 557.8 386 73.8
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.5e-156 556.6 386 73.3
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 2.5e-156 555.8 383 72.3
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.5e-156 555.8 383 72.3
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 9.5e-156 553.9 383 73.4
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.2e-155 553.5 385 71.9
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.6e-155 553.1 385 71.9
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 2.1e-155 552.7 390 73.3
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.8e-155 552.4 395 69.4
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.7e-155 551.6 387 71.6
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.4e-154 550.1 396 69.7
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 1.8e-154 549.7 386 73.8
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 2.4e-154 549.3 390 71.0
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 2.4e-154 549.3 390 71.0
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 3.1e-154 548.9 383 71.8
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 8.9e-154 547.4 390 70.8
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.5e-153 546.6 389 71.5
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 1.3e-152 543.5 389 71.7
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 2.2e-152 542.7 387 70.3
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 2.9e-152 542.3 395 69.4
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 3.8e-152 542.0 397 70.0
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 4.9e-152 541.6 390 72.1
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.1e-151 540.4 390 71.0
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.1e-151 540.4 391 71.4
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 1.1e-151 540.4 369 73.4
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.4e-151 540.0 389 69.4
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.4e-151 540.0 342 76.9
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 1.9e-151 539.7 391 71.4
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 1.9e-151 539.7 389 70.2
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 5.4e-151 538.1 342 76.9
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 7.1e-151 537.7 393 70.0
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.2e-150 537.0 392 69.6
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.2e-150 537.0 390 70.3
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 2.7e-150 535.8 390 71.0
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 7.8e-150 534.3 393 68.7
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 7.8e-150 534.3 395 70.9
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 1.3e-149 533.5 299 84.6
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.3e-149 532.7 388 69.6
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 3.9e-149 531.9 391 70.1
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 6.6e-149 531.2 382 69.4
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 8.7e-149 530.8 386 69.2
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.5e-148 530.0 392 67.1
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 2.5e-148 529.3 384 69.0
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 4.3e-148 528.5 388 69.1
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 9.6e-148 527.3 382 69.4
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 9.6e-148 527.3 384 71.4
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 2.8e-147 525.8 404 66.1
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 3.6e-147 525.4 389 69.2
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.4e-146 523.5 385 67.5
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 2.4e-146 522.7 382 69.6
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 2.4e-146 522.7 382 69.6
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 9.0e-146 520.8 382 68.1
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 1.2e-145 520.4 385 67.3
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.2e-145 520.4 388 68.6
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 3.4e-145 518.8 386 68.9
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 3.4e-145 518.8 392 67.3
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 9.9e-145 517.3 385 66.8
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 1.3e-144 516.9 384 70.6
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 2.2e-144 516.2 398 65.8
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 7.1e-143 511.1 386 67.4
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.0e-141 507.3 389 66.6
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.9e-140 503.1 387 65.1
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 4.3e-140 501.9 467 59.1
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 1.3e-139 500.4 387 65.9
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 4.8e-139 498.4 434 61.3
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 8.1e-139 497.7 304 75.3
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.1e-138 497.3 381 66.9
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 3.4e-137 492.3 381 66.7
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 4.5e-137 491.9 292 80.1
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 9.9e-137 490.7 495 57.2
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.7e-136 490.0 389 64.8
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 2.4e-135 486.1 384 64.1
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 4.2e-135 485.3 392 65.3
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 4.2e-135 485.3 394 63.5
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 6.7e-133 478.0 437 59.7
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 2.5e-132 476.1 381 63.8
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.1e-131 473.0 396 63.9
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.7e-131 472.2 394 61.7
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 8.1e-131 471.1 383 62.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 9.9e-129 464.2 276 80.4
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 8.4e-128 461.1 304 71.1
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 8.4e-128 461.1 296 73.0
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 8.7e-125 451.1 397 58.9
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.3e-124 449.1 394 58.9
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 5.8e-121 438.3 366 62.8
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 6.5e-112 408.3 388 58.5
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 7.7e-105 384.8 329 63.2
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.7e-104 383.6 296 61.5
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 3.8e-104 382.5 293 61.8
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 9.4e-103 377.9 293 59.7
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 1.0e-101 374.4 228 77.2
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 1.2e-97 360.9 293 57.3
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 2.1e-94 350.1 213 76.5
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 2.1e-94 350.1 213 76.5
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 2.7e-94 349.7 213 76.5
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 2.0e-92 343.6 217 71.4
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 4.1e-90 335.9 294 60.2
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 3.2e-87 326.2 213 72.8
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 2.8e-83 313.2 289 57.8
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 5.3e-82 308.9 291 49.8
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 4.1e-74 282.7 289 46.7
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 4.5e-73 279.3 306 46.1
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 1.3e-72 277.7 230 61.3
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.2e-70 271.2 177 72.9
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 1.3e-64 251.1 278 45.7
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 1.1e-63 248.1 157 77.7
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 4.7e-54 216.1 135 77.8
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 7.1e-42 175.6 171 56.1
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.9e-40 169.9 179 48.0
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 9.5e-39 165.2 161 49.7
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 3.2e-34 150.2 106 67.0
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.3e-31 140.2 177 45.2
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 1.6e-30 137.9 95 64.2
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 6.0e-25 119.4 87 63.2
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 7.3e-23 112.5 66 74.2
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 6.0e-17 92.8 49 83.7
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 6.0e-17 92.8 49 83.7
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 8.4e-11 72.4 110 40.9
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 2.1e-09 67.8 41 73.2
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 8.2e-06 55.8 43 58.1


User provided reference genes

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