Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 2.3e-60 235.7 149 100.0
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 2.9e-31 139.0 96 67.7
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 3.9e-28 128.6 100 62.0
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 5.1e-28 128.3 106 58.5
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 3.6e-26 122.1 86 64.0
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 4.7e-26 121.7 86 62.8
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.4e-25 120.2 81 65.4
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.4e-25 120.2 85 63.5
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 2.4e-25 119.4 106 52.8
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 3.1e-25 119.0 86 61.6
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 4.0e-25 118.6 87 60.9
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 9.0e-25 117.5 85 60.0
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 9.0e-25 117.5 81 64.2
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 9.0e-25 117.5 81 64.2
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.5e-24 116.7 94 59.6
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 2.0e-24 116.3 104 50.0
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 3.4e-24 115.5 104 50.0
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 3.4e-24 115.5 101 58.4
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 3.4e-24 115.5 89 57.3
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 4.4e-24 115.2 93 59.1
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 5.8e-24 114.8 91 58.2
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 5.8e-24 114.8 101 58.4
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 9.9e-24 114.0 88 54.5
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.3e-23 113.6 88 53.4
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 1.3e-23 113.6 88 59.1
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 1.3e-23 113.6 88 54.5
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 2.2e-23 112.8 100 54.0
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 2.9e-23 112.5 104 49.0
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 3.8e-23 112.1 85 57.6
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 4.9e-23 111.7 104 48.1
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 6.4e-23 111.3 86 58.1
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.1e-22 110.5 83 60.2
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 1.9e-22 109.8 89 58.4
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 1.9e-22 109.8 90 51.1
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 4.2e-22 108.6 80 62.5
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 5.4e-22 108.2 85 58.8
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 9.3e-22 107.5 87 55.2
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 9.3e-22 107.5 90 55.6
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.2e-21 107.1 103 51.5
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 2.1e-21 106.3 94 55.3
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 4.6e-21 105.1 68 70.6
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 6.0e-21 104.8 90 54.4
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 1.0e-20 104.0 105 48.6
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 1.3e-20 103.6 86 53.5
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 1.3e-20 103.6 131 47.3
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 1.7e-20 103.2 86 54.7
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 2.3e-20 102.8 80 56.2
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 2.3e-20 102.8 92 53.3
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 2.3e-20 102.8 86 54.7
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 6.6e-20 101.3 109 46.8
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 8.7e-20 100.9 87 54.0
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 2.5e-19 99.4 108 46.3
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 4.3e-19 98.6 108 43.5
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 2.8e-18 95.9 101 48.5
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 4.8e-18 95.1 69 63.8
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 1.8e-17 93.2 85 50.6
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 3.1e-17 92.4 51 74.5
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 4.0e-17 92.0 49 79.6
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 4.0e-17 92.0 49 79.6
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 4.0e-17 92.0 49 79.6
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 4.0e-17 92.0 49 79.6
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 6.9e-17 91.3 49 77.6
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 9.0e-17 90.9 49 77.6
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 2.0e-16 89.7 49 75.5
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 2.6e-16 89.4 96 46.9
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 5.8e-16 88.2 56 64.3
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 1.3e-15 87.0 49 73.5
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 3.8e-15 85.5 88 45.5
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 4.9e-15 85.1 48 75.0
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 6.4e-15 84.7 48 72.9
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 5.4e-14 81.6 47 72.3
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 9.3e-14 80.9 48 75.0
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 1.2e-13 80.5 48 72.9
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 2.1e-13 79.7 75 45.3
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 2.1e-13 79.7 65 52.3
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 1.8e-12 76.6 97 37.1
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 5.1e-12 75.1 88 40.9
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 1.1e-11 73.9 77 44.2
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 4.3e-11 72.0 95 42.1
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 8.1e-10 67.8 143 31.5
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.8e-09 66.6 39 71.8
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 3.1e-09 65.9 37 70.3
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 9.0e-09 64.3 40 67.5
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 1.2e-08 63.9 36 72.2
SGA_v2.0_scaffold118G32612 Striga asiatica HOM05D007718 ORTHO05D009752 4.5e-08 62.0 61 55.7
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 5.8e-08 61.6 36 69.4
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 2.9e-07 59.3 37 62.2


User provided reference genes

Program Settings