Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 6.0e-152 540.8 274 100.0
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 7.7e-123 444.1 278 81.7
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.0e-114 417.2 287 76.3
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.3e-109 400.2 282 74.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 7.2e-105 384.4 289 69.6
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.6e-104 383.3 287 69.3
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 6.1e-104 381.3 287 69.0
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.0e-103 380.6 244 78.3
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 8.8e-103 377.5 258 74.0
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 1.5e-102 376.7 264 73.1
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.0e-102 376.3 251 76.5
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 2.6e-102 375.9 288 69.8
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 3.4e-102 375.6 231 79.7
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 7.5e-102 374.4 231 79.7
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 1.3e-101 373.6 284 70.1
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.7e-101 373.2 258 71.3
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.7e-101 373.2 247 75.7
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.2e-101 372.9 256 73.8
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 3.7e-101 372.1 282 71.3
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 3.7e-101 372.1 244 76.2
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.4e-100 369.4 240 77.1
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 3.1e-100 369.0 275 69.5
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 3.1e-100 369.0 266 71.8
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 3.1e-100 369.0 231 78.8
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 3.1e-100 369.0 211 84.4
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 4.1e-100 368.6 275 69.8
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 4.1e-100 368.6 230 77.4
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.4e-100 368.2 272 69.1
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 5.4e-100 368.2 232 79.3
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 5.4e-100 368.2 238 76.5
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 5.4e-100 368.2 257 71.2
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 7.0e-100 367.9 258 70.5
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 7.0e-100 367.9 234 77.8
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.1e-100 367.5 278 70.1
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.2e-99 367.1 257 72.8
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.2e-99 367.1 267 71.5
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.2e-99 367.1 271 70.8
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.6e-99 366.7 265 72.1
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.6e-99 366.7 285 68.1
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 2.7e-99 365.9 253 74.7
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 3.5e-99 365.5 235 77.4
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 4.5e-99 365.2 216 81.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 4.5e-99 365.2 256 72.7
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.0e-98 364.0 235 75.7
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.3e-98 363.6 262 69.8
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.3e-98 363.6 265 71.7
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.3e-98 363.6 235 77.4
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.3e-98 362.8 276 68.5
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.3e-98 362.8 231 77.1
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 2.3e-98 362.8 231 77.5
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 2.9e-98 362.5 282 67.0
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.8e-98 362.1 235 77.0
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 8.6e-98 360.9 260 72.7
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 8.6e-98 360.9 229 76.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.1e-97 360.5 231 75.8
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.1e-97 360.5 231 75.8
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 1.1e-97 360.5 247 74.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 1.5e-97 360.1 266 69.2
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.9e-97 359.8 268 69.8
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 2.5e-97 359.4 231 76.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 3.2e-97 359.0 231 75.3
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 4.2e-97 358.6 231 75.3
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 5.5e-97 358.2 231 74.5
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 5.5e-97 358.2 269 69.1
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 9.5e-97 357.5 261 70.1
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 9.5e-97 357.5 232 77.2
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 9.5e-97 357.5 263 69.6
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 1.2e-96 357.1 264 70.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.2e-96 357.1 231 76.6
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.6e-96 356.7 231 75.3
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.6e-96 356.7 252 71.4
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.6e-96 356.7 220 79.5
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 2.1e-96 356.3 288 66.7
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 4.7e-96 355.1 238 73.1
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.7e-96 355.1 282 67.7
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 4.7e-96 355.1 241 73.0
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 6.1e-96 354.8 238 73.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 6.1e-96 354.8 238 73.9
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 6.1e-96 354.8 229 75.1
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 8.0e-96 354.4 235 74.5
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.0e-95 354.0 231 75.3
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 4.0e-95 352.1 265 68.7
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.5e-94 350.1 264 67.4
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 3.4e-94 349.0 285 65.3
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 7.5e-94 347.8 265 70.6
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.8e-94 347.4 231 76.2
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.8e-94 347.4 231 76.2
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.8e-93 345.9 231 75.8
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 6.3e-93 344.7 275 63.3
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.3e-93 344.7 268 67.2
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.8e-92 343.2 311 59.8
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 4.1e-92 342.0 251 68.5
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.3e-90 337.0 230 72.2
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.7e-90 336.7 231 71.9
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.3e-90 336.3 259 66.8
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 9.5e-89 330.9 232 70.3
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.2e-88 330.5 210 77.1
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 4.1e-84 315.5 236 66.1
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.9e-76 290.0 193 75.1
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.2e-75 287.3 240 62.9
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.0e-75 285.0 204 65.2
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 2.5e-73 279.6 202 64.9
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.4e-71 273.9 288 57.3
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.7e-69 266.9 223 64.6
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.1e-68 264.2 236 55.9
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.4e-63 247.3 199 64.3
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 4.0e-63 245.7 194 67.0
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 3.4e-62 242.7 222 57.2
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.4e-36 156.8 239 43.5
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 5.5e-36 155.6 124 68.5
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 7.9e-35 151.8 181 46.4
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 7.4e-33 145.2 177 49.2
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.1e-31 139.8 95 75.8
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 8.4e-29 131.7 225 37.8
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.4e-28 131.0 158 39.9
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.9e-25 120.6 130 46.9
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.5e-25 120.2 88 69.3
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.2e-08 63.9 80 42.5
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 3.4e-06 56.6 128 30.5


User provided reference genes

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