Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 1.4e-64 249.6 141 100.0
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 4.9e-49 198.0 139 71.9
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 6.0e-47 191.0 139 83.5
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 1.4e-43 179.9 139 68.3
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 5.3e-43 177.9 139 68.3
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 4.5e-42 174.9 139 75.5
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 5.8e-42 174.5 139 76.3
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 7.6e-42 174.1 139 66.2
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 1.0e-41 173.7 139 66.2
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 1.0e-41 173.7 139 66.2
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 2.2e-41 172.6 139 73.4
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.9e-41 172.2 139 74.1
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 4.9e-41 171.4 139 74.1
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 6.5e-41 171.0 137 76.6
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 6.5e-41 171.0 140 62.9
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 6.5e-41 171.0 140 62.9
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 8.4e-41 170.6 141 75.2
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.1e-40 170.2 139 73.4
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 1.4e-40 169.9 139 72.7
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 1.9e-40 169.5 139 73.4
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 2.5e-40 169.1 139 62.6
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 5.5e-40 167.9 140 62.1
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 7.1e-40 167.5 140 62.1
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 9.3e-40 167.2 139 71.2
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 1.2e-39 166.8 139 72.7
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.6e-39 166.4 142 64.1
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.6e-39 166.4 142 64.1
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 2.1e-39 166.0 139 69.8
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 2.1e-39 166.0 135 76.3
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 2.7e-39 165.6 139 73.4
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 4.6e-39 164.9 139 71.2
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 1.8e-38 162.9 135 72.6
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 2.3e-38 162.5 143 72.7
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 3.0e-38 162.2 142 69.7
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 3.9e-38 161.8 143 72.0
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 5.1e-38 161.4 139 61.2
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 6.7e-38 161.0 142 70.4
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 8.7e-38 160.6 139 61.2
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 1.1e-37 160.2 142 71.1
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 1.5e-37 159.8 143 61.5
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 1.9e-37 159.5 139 69.8
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 1.9e-37 159.5 137 70.8
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 2.5e-37 159.1 140 70.7
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 2.5e-37 159.1 142 69.7
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 4.3e-37 158.3 139 67.6
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 9.6e-37 157.1 139 71.9
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 1.6e-36 156.4 140 60.0
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 1.6e-36 156.4 141 61.0
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 2.1e-36 156.0 139 66.9
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 2.8e-36 155.6 140 55.7
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 2.8e-36 155.6 140 68.6
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.1e-35 153.7 136 70.6
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 1.8e-35 152.9 139 60.4
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 2.4e-35 152.5 137 70.1
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 9.0e-35 150.6 140 66.4
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 9.0e-35 150.6 135 65.9
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 1.2e-34 150.2 139 68.3
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 1.2e-34 150.2 139 65.5
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 2.0e-34 149.4 135 70.4
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 2.0e-34 149.4 113 74.3
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 2.0e-34 149.4 139 69.1
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 3.4e-34 148.7 138 57.2
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 5.9e-34 147.9 140 58.6
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 7.6e-34 147.5 139 56.1
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 7.6e-34 147.5 139 66.9
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 1.7e-33 146.4 139 56.1
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 1.7e-33 146.4 139 58.3
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 2.2e-33 146.0 138 56.5
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 3.8e-33 145.2 134 67.9
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 3.8e-33 145.2 137 67.2
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 3.8e-33 145.2 137 65.0
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 6.5e-33 144.4 139 57.6
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 6.5e-33 144.4 139 57.6
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 1.1e-32 143.7 141 59.6
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 1.1e-32 143.7 141 59.6
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 1.1e-32 143.7 144 55.6
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.4e-32 143.3 139 66.9
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 3.2e-32 142.1 136 55.9
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 9.3e-32 140.6 137 54.7
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 1.6e-31 139.8 139 65.5
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 1.6e-31 139.8 135 64.4
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 1.6e-31 139.8 139 56.1
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 2.1e-31 139.4 139 68.3
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 2.7e-31 139.0 135 66.7
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 1.3e-30 136.7 139 66.2
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 1.3e-30 136.7 137 65.0
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 3.0e-30 135.6 137 55.5
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 6.7e-30 134.4 116 73.3
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 4.8e-28 128.3 154 49.4
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 1.1e-27 127.1 145 51.0
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 1.2e-26 123.6 113 70.8
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 5.9e-26 121.3 98 81.6
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 4.2e-24 115.2 120 55.8
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 6.1e-23 111.3 100 62.0
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 4.4e-21 105.1 90 65.6
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 5.7e-21 104.8 140 45.0
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 9.7e-21 104.0 133 47.4
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 1.3e-20 103.6 130 43.1
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 6.3e-20 101.3 139 43.2
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 5.3e-19 98.2 148 45.3
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 7.7e-18 94.4 122 56.6
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 1.3e-17 93.6 132 37.1
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 2.2e-17 92.8 75 60.0
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 2.2e-17 92.8 78 64.1
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.0e-17 91.7 140 39.3
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 5.0e-17 91.7 116 43.1
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 3.2e-16 89.0 115 56.5
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 2.1e-15 86.3 129 38.8
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 9.7e-13 77.4 114 41.2
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 1.3e-12 77.0 78 59.0
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 2.4e-11 72.8 71 53.5
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 2.4e-11 72.8 78 46.2
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 1.2e-10 70.5 70 55.7
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 2.9e-09 65.9 49 65.3
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 8.0e-07 57.8 77 46.8
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.2e-06 55.1 79 41.8


User provided reference genes

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