Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 0.0e+00 1192.9 589 100.0
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 1.5e-269 932.6 589 81.5
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.4e-238 828.9 587 73.9
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.3e-236 823.2 575 74.3
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.3e-225 785.8 598 70.7
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.1e-222 776.9 598 70.1
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 6.5e-220 767.7 589 71.3
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 3.7e-215 751.9 593 69.3
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 6.3e-215 751.1 594 69.2
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 6.1e-210 734.6 590 67.3
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 1.2e-205 720.3 594 65.7
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 3.8e-204 715.3 498 74.1
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.6e-202 709.9 467 76.9
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 8.0e-202 707.6 502 72.1
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.0e-201 705.7 485 74.2
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 2.0e-200 703.0 435 79.3
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 4.4e-200 701.8 491 74.1
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 5.7e-200 701.4 491 73.7
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.7e-199 699.9 633 62.2
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 2.2e-199 699.5 539 69.4
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 6.3e-199 698.0 492 73.2
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 6.3e-199 698.0 591 64.0
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 8.3e-199 697.6 435 78.9
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 8.3e-199 697.6 524 69.5
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.4e-198 696.8 607 64.6
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.4e-198 696.0 614 64.0
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.1e-198 695.7 491 74.5
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 3.1e-198 695.7 503 71.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 3.1e-198 695.7 487 73.7
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 5.4e-198 694.9 481 74.0
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 7.0e-198 694.5 499 72.3
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 9.2e-198 694.1 410 82.9
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 7.8e-197 691.0 429 80.7
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.7e-196 689.9 411 82.2
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 5.0e-196 688.3 594 64.1
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.5e-195 686.8 450 76.2
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.5e-195 686.0 453 76.2
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 3.3e-195 685.6 607 62.9
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 3.3e-195 685.6 442 76.5
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 5.6e-195 684.9 497 71.6
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 7.3e-195 684.5 622 62.7
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 9.5e-195 684.1 485 72.8
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 9.5e-195 684.1 602 63.0
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.2e-194 683.7 617 62.6
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.6e-194 683.3 409 81.2
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.6e-194 683.3 443 77.0
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 4.7e-194 681.8 448 76.3
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 8.0e-194 681.0 485 72.2
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 8.0e-194 681.0 448 76.6
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.0e-193 680.6 487 72.7
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.8e-193 679.9 609 62.1
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.8e-193 679.9 601 63.1
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 4.0e-193 678.7 500 70.2
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 5.2e-193 678.3 462 73.8
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 6.8e-193 677.9 601 63.1
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 2.6e-192 676.0 484 73.8
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 2.6e-192 676.0 493 71.6
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 3.4e-192 675.6 596 64.3
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 3.4e-192 675.6 600 62.8
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 5.8e-192 674.9 500 70.4
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.3e-191 673.7 465 74.0
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.2e-191 672.9 606 62.2
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 3.7e-191 672.2 424 79.2
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 6.4e-191 671.4 589 63.2
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.4e-191 671.4 611 62.0
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 8.3e-191 671.0 602 61.3
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 8.3e-191 671.0 606 62.9
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 8.3e-191 671.0 596 62.6
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 8.3e-191 671.0 596 63.3
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 1.1e-190 670.6 609 61.9
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-190 670.6 612 61.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.4e-190 670.2 600 63.0
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.8e-190 669.8 599 62.4
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.4e-190 669.5 408 80.6
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 5.4e-190 668.3 498 69.7
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 7.0e-190 667.9 430 75.8
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 7.0e-190 667.9 491 70.7
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 1.2e-189 667.2 496 71.2
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.6e-189 666.8 599 61.9
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.0e-189 666.4 449 75.1
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 3.5e-189 665.6 449 75.1
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 6.0e-189 664.8 509 68.8
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.0e-188 664.1 599 62.8
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.3e-188 663.7 446 74.4
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 3.0e-188 662.5 484 70.5
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 3.9e-188 662.1 405 80.5
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.1e-187 660.6 436 74.3
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.5e-187 660.2 406 80.8
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 2.5e-187 659.4 626 59.7
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 3.3e-187 659.1 414 79.5
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 2.1e-186 656.4 479 68.9
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.4e-185 653.7 624 60.3
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 6.8e-185 651.4 592 61.8
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.2e-184 650.6 410 78.5
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.5e-184 650.2 405 78.8
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.6e-184 649.4 405 78.5
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 3.4e-184 649.0 501 68.3
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 9.8e-184 647.5 435 72.0
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.3e-183 647.1 418 77.3
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 6.4e-183 644.8 435 75.2
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.9e-182 643.3 456 71.5
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.4e-182 642.9 451 74.1
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 4.1e-182 642.1 468 69.7
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 7.0e-182 641.3 585 61.4
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.0e-181 639.8 419 74.7
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.0e-181 639.8 593 59.5
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 1.7e-180 636.7 409 78.2
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 3.0e-180 636.0 461 72.0
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.9e-180 635.6 486 68.1
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 6.6e-180 634.8 416 76.4
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 8.6e-180 634.4 448 71.4
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 1.5e-179 633.6 448 71.4
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.5e-179 633.6 448 71.4
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 2.5e-179 632.9 448 71.4
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.5e-179 632.9 480 67.1
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.3e-179 632.5 616 58.3
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 4.3e-179 632.1 599 60.3
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 9.5e-179 630.9 448 71.2
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 2.1e-178 629.8 540 62.6
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 2.3e-177 626.3 426 74.4
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 8.9e-177 624.4 455 69.2
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 2.6e-176 622.9 487 66.7
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 3.4e-176 622.5 427 73.8
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 3.4e-176 622.5 427 73.8
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 3.4e-176 622.5 427 73.8
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 5.8e-176 621.7 468 69.7
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 5.8e-176 621.7 468 69.7
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 2.2e-175 619.8 366 82.8
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 3.7e-175 619.0 449 69.7
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 3.2e-174 615.9 429 72.3
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 3.2e-174 615.9 583 59.0
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 2.7e-173 612.8 389 77.4
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 3.9e-172 609.0 605 56.9
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.6e-162 575.9 363 78.2
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.7e-159 567.0 358 77.1
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.0e-156 556.2 588 56.8
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 4.3e-147 525.8 443 61.4
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 5.6e-147 525.4 426 62.7
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.8e-143 512.7 567 51.9
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.2e-141 507.7 357 70.0
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 5.1e-132 475.7 374 64.4
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 6.7e-132 475.3 373 67.0
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.2e-127 460.3 281 77.2
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 1.2e-99 368.2 209 82.8
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.2e-93 348.2 197 82.7
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 1.2e-93 348.2 398 48.7
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.4e-89 332.8 386 53.9
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 1.5e-83 314.7 180 81.7
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.2e-75 288.5 159 83.6
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 9.8e-75 285.4 220 66.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.9e-74 283.9 156 84.0
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.9e-74 283.9 156 84.0
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 3.4e-67 260.4 391 42.2
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 5.6e-62 243.0 358 38.8
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 6.0e-56 223.0 174 68.4
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 2.5e-54 217.6 333 37.8
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.7e-48 197.6 149 69.8
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.1e-46 192.2 286 37.1
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 2.4e-41 174.5 109 77.1
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.3e-39 167.9 186 52.7
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 4.5e-35 153.7 110 65.5
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.4e-34 149.8 88 77.3
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 2.3e-31 141.4 144 55.6
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 2.3e-31 141.4 83 79.5
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 5.1e-31 140.2 215 36.7
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.9e-30 138.3 99 71.7
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 4.3e-30 137.1 83 77.1
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 2.6e-27 127.9 129 54.3
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 4.2e-25 120.6 227 42.7
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 2.8e-21 107.8 119 49.6
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 7.4e-14 83.2 97 48.5
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 3.7e-13 80.9 173 33.5
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 1.1e-12 79.3 111 43.2
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.3e-10 72.4 166 33.7
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 5.0e-10 70.5 40 80.0
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 2.3e-07 61.6 32 81.2
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 2.0e-06 58.5 55 58.2


User provided reference genes

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