Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 5.7e-51 204.1 116 100.0
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 7.0e-25 117.5 111 56.8
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 2.2e-23 112.5 114 66.7
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 3.2e-22 108.6 113 62.8
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 3.2e-22 108.6 121 52.1
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.4e-22 107.1 84 64.3
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.6e-21 106.3 84 64.3
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.6e-21 106.3 80 66.2
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.1e-21 105.9 84 64.3
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 2.1e-21 105.9 80 78.8
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 2.7e-21 105.5 105 53.3
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 3.6e-21 105.1 118 61.9
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 3.6e-21 105.1 88 60.2
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 3.6e-21 105.1 80 66.2
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 4.7e-21 104.8 86 61.6
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 8.0e-21 104.0 118 61.0
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.0e-20 103.6 88 60.2
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.0e-20 103.6 120 49.2
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 3.0e-20 102.1 98 56.1
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.0e-20 101.7 82 62.2
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 4.0e-20 101.7 118 48.3
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 4.0e-20 101.7 103 53.4
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 4.0e-20 101.7 98 56.1
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 4.0e-20 101.7 98 56.1
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 4.0e-20 101.7 85 61.2
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 8.8e-20 100.5 96 54.2
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 8.8e-20 100.5 76 64.5
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.2e-19 100.1 86 59.3
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.2e-19 100.1 88 58.0
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.2e-19 100.1 76 67.1
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.5e-19 99.8 90 56.7
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.0e-19 99.4 88 56.8
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.6e-19 99.0 84 60.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 2.6e-19 99.0 96 57.3
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 3.4e-19 98.6 92 63.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 3.4e-19 98.6 91 57.1
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 4.4e-19 98.2 105 48.6
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 4.4e-19 98.2 81 60.5
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 4.4e-19 98.2 84 76.2
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 5.7e-19 97.8 76 64.5
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 5.7e-19 97.8 99 49.5
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 9.7e-19 97.1 84 58.3
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 9.7e-19 97.1 84 59.5
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.3e-18 96.7 84 58.3
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 1.3e-18 96.7 83 67.5
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.3e-18 96.7 114 49.1
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.3e-18 96.7 85 56.5
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 1.3e-18 96.7 94 66.0
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.3e-18 96.7 82 58.5
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.7e-18 96.3 121 56.2
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.2e-18 95.9 84 58.3
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.8e-18 95.5 78 80.8
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 2.8e-18 95.5 113 60.2
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 3.7e-18 95.1 84 57.1
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 4.8e-18 94.7 115 47.8
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 4.8e-18 94.7 83 56.6
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 6.3e-18 94.4 72 62.5
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 6.3e-18 94.4 72 62.5
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 6.3e-18 94.4 117 46.2
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 6.3e-18 94.4 97 54.6
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.8e-17 92.8 63 68.3
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.8e-17 92.8 80 76.2
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.4e-17 92.4 63 68.3
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.4e-17 92.4 63 68.3
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 2.4e-17 92.4 119 52.9
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 2.7e-16 89.0 63 82.5
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 7.7e-16 87.4 62 80.6
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.9e-15 85.5 62 69.4
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 5.0e-15 84.7 77 75.3
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 3.2e-14 82.0 73 74.0
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.7e-13 79.0 76 53.9
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 4.0e-12 75.1 76 52.6
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 6.8e-12 74.3 89 46.1
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.5e-11 73.2 55 61.8
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.0e-11 72.8 66 53.0
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.6e-11 72.4 90 44.4
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 5.7e-11 71.2 52 63.5
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.7e-10 69.7 110 43.6
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.4e-09 66.6 97 43.3
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.5e-06 56.6 45 62.2
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 1.9e-06 56.2 46 65.2


User provided reference genes

Program Settings