Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 2.0e-158 562.4 279 100.0
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.0e-86 323.2 284 60.6
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 3.2e-84 315.8 291 60.1
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 1.2e-78 297.4 192 71.4
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.2e-78 297.4 310 55.8
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 2.5e-76 289.7 198 69.7
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.7e-75 286.2 192 74.5
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 8.8e-74 281.2 209 67.5
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 3.3e-73 279.3 239 59.4
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.3e-72 277.3 255 56.5
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.7e-72 276.9 255 56.9
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.7e-72 275.8 189 69.8
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 4.8e-72 275.4 252 56.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.8e-71 273.5 197 66.0
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 3.1e-71 272.7 197 66.0
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 6.9e-71 271.6 290 52.8
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 6.9e-71 271.6 208 62.0
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 9.1e-71 271.2 208 62.0
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 1.5e-70 270.4 192 64.6
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 5.9e-70 268.5 256 55.5
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 7.7e-70 268.1 193 63.7
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 1.0e-69 267.7 258 54.3
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 1.3e-69 267.3 240 56.2
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 1.3e-69 267.3 205 63.9
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.9e-69 266.2 208 63.5
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.9e-69 266.2 239 57.3
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 2.9e-69 266.2 280 51.1
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.0e-69 265.4 208 63.5
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 6.5e-69 265.0 231 60.2
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 8.5e-69 264.6 271 52.0
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-68 263.8 197 66.0
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.4e-68 263.8 194 66.5
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.9e-68 263.5 282 51.8
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 2.5e-68 263.1 230 56.5
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.2e-68 262.7 197 65.5
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 4.2e-68 262.3 198 65.7
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 4.2e-68 262.3 283 51.2
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.5e-68 261.9 205 63.4
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 9.4e-68 261.2 193 63.2
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.2e-67 260.8 236 56.8
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.2e-67 260.8 241 55.2
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 1.6e-67 260.4 198 65.7
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 4.7e-67 258.8 193 65.8
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 6.1e-67 258.5 236 55.9
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.0e-66 257.7 197 65.5
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.4e-66 257.3 191 62.8
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.8e-66 256.9 198 63.1
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.0e-66 256.1 192 64.6
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.9e-66 255.8 200 62.0
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 3.9e-66 255.8 242 56.2
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 3.9e-66 255.8 193 66.3
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 8.8e-66 254.6 211 57.8
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 8.8e-66 254.6 236 55.1
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 1.1e-65 254.2 184 64.1
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 2.0e-65 253.4 195 63.1
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 3.3e-65 252.7 192 63.5
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 5.7e-65 251.9 215 56.7
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 7.4e-65 251.5 230 57.8
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 9.7e-65 251.1 192 63.5
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 4.8e-64 248.8 198 64.6
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.8e-63 246.9 184 65.2
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 3.1e-63 246.1 199 61.8
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 5.3e-63 245.4 192 62.0
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 5.3e-63 245.4 208 60.6
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 7.0e-63 245.0 220 56.8
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.6e-62 243.8 207 58.0
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 2.0e-62 243.4 192 62.0
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 3.5e-62 242.7 192 62.5
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 4.5e-62 242.3 192 61.5
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 4.5e-62 242.3 228 57.0
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 5.9e-62 241.9 192 61.5
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 5.9e-62 241.9 192 61.5
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 7.7e-62 241.5 192 61.5
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 2.2e-61 240.0 186 62.4
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.9e-61 239.6 269 50.9
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 3.8e-61 239.2 208 59.1
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 5.0e-61 238.8 192 62.0
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 5.0e-61 238.8 208 58.7
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 1.5e-60 237.3 201 57.7
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.9e-60 236.9 192 61.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.9e-60 236.9 277 50.5
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 2.5e-60 236.5 269 48.7
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 5.5e-60 235.3 217 55.8
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 7.2e-60 235.0 194 60.8
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 9.7e-57 224.6 197 57.9
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.3e-56 224.2 155 66.5
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 2.8e-56 223.0 192 58.3
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 2.8e-56 223.0 188 60.6
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 9.1e-55 218.0 239 49.8
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.6e-54 217.2 192 58.9
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 4.5e-54 215.7 243 49.4
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.9e-54 215.3 224 50.4
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.1e-52 211.1 226 50.4
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 2.5e-52 209.9 216 50.0
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.6e-51 207.2 187 56.7
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 5.2e-50 202.2 192 52.1
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 3.4e-49 199.5 188 56.9
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 8.3e-48 194.9 145 63.4
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 2.4e-47 193.4 194 49.0
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 3.1e-47 193.0 147 65.3
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 5.0e-37 159.1 178 47.8
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.5e-36 157.5 185 48.6
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.5e-36 157.5 126 65.9
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.3e-36 156.4 109 67.0
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 9.5e-36 154.8 163 50.3
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 6.1e-35 152.1 125 62.4
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 2.3e-34 150.2 125 61.6
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 5.7e-33 145.6 145 52.4
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 9.2e-31 138.3 131 55.0
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.0e-29 134.8 119 57.1
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 4.3e-28 129.4 184 40.2
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 2.1e-27 127.1 123 55.3
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 4.0e-26 122.9 131 50.4
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.0e-26 122.9 126 54.8
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.7e-24 117.5 193 42.0
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.7e-22 110.2 111 53.2
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-19 100.1 108 43.5
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 1.2e-17 94.7 116 43.1
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.2e-17 94.7 102 52.9
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.7e-16 90.9 67 59.7
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 6.8e-10 68.9 45 66.7
Solyc12g099940.2 Solanum lycopersicum HOM05D004023 ORTHO05D004681 9.2e-07 58.5 200 24.5
Sopen12g034560 Solanum pennellii HOM05D004023 ORTHO05D004681 9.2e-07 58.5 200 24.5
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 2.1e-06 57.4 112 33.0
Actinidia29930 Actinidia chinensis HOM05D004023 ORTHO05D004681 7.8e-06 55.5 179 25.7


User provided reference genes

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