Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10560 Striga asiatica HOM05D000576 ORTHO05D000368 9.2e-281 969.5 480 100.0
SGA_v2.0_scaffold24G10555 Striga asiatica HOM05D000576 ORTHO05D000368 3.6e-107 392.9 390 58.2
SGA_v2.0_scaffold196G40959 Striga asiatica HOM05D000576 ORTHO05D000368 1.9e-68 264.2 542 37.1
SGA_v2.0_scaffold287G47213 Striga asiatica HOM05D000576 ORTHO05D000368 2.6e-57 227.3 524 36.5
SGA_v2.0_scaffold118G32496 Striga asiatica HOM05D000576 ORTHO05D012667 7.5e-57 225.7 515 35.5
SGA_v2.0_scaffold11G05695 Striga asiatica HOM05D000576 ORTHO05D000368 3.5e-54 216.9 501 36.7
Migut.C01300 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.1e-39 166.0 482 29.3
Migut.C01282 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.0e-37 162.2 481 29.7
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.3e-37 161.8 468 31.6
Migut.C01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.9e-37 160.2 470 30.0
Migut.C01162 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.3e-36 156.8 506 29.2
Migut.C01299 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-35 154.5 477 28.5
Migut.N03255 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.1e-29 133.3 514 27.2
Migut.C01202 Erythranthe guttata HOM05D031909 ORTHO05D000368 1.5e-25 121.7 256 32.4
Migut.C01239 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.9e-16 90.9 122 39.3
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 4.9e-16 90.1 481 25.2
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 7.1e-15 86.3 479 24.0
Migut.C01235 Erythranthe guttata HOM05D013549 ORTHO05D000368 1.3e-13 82.0 131 37.4
CAN.G337.7 Capsicum annuum HOM05D009846 ORTHO05D000368 1.6e-11 75.1 478 24.3
CAN.G337.8 Capsicum annuum HOM05D009846 ORTHO05D000368 1.6e-11 75.1 478 24.3
Cc08_g15490 Coffea canephora HOM05D000576 ORTHO05D000368 6.2e-11 73.2 488 25.2
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 6.2e-11 73.2 452 25.2
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 2.4e-10 71.2 244 25.8
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 6.9e-10 69.7 437 25.9
Aqoxy1G01400 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.2e-09 68.9 453 21.4
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.2e-09 68.9 475 22.7
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.5e-09 68.6 426 24.6
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 3.4e-09 67.4 224 27.2
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.4e-09 67.4 483 23.8
CAN.G1156.32 Capsicum annuum HOM05D013549 ORTHO05D000368 4.5e-09 67.0 476 25.2
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.0e-08 65.9 459 24.4
CAN.G1156.42 Capsicum annuum HOM05D013549 ORTHO05D000368 2.9e-08 64.3 484 22.3
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.9e-08 64.3 200 27.5
Rhsim02G0051900 Rhododendron simsii HOM05D000576 ORTHO05D015329 3.8e-08 63.9 191 24.6
FvH4_6g01850 Fragaria vesca HOM05D000576 ORTHO05D000368 4.9e-08 63.5 437 22.4
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 4.9e-08 63.5 503 22.7
COL.COLO4_31621 Corchorus olitorius HOM05D010825 ORTHO05D012667 8.4e-08 62.8 446 23.1
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.1e-07 62.4 254 26.0
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 2.5e-07 61.2 466 21.7
Migut.J00208 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.5e-07 61.2 413 23.0
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 2.5e-07 61.2 427 24.6
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 3.2e-07 60.8 419 22.4
Migut.J00162 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.2e-07 60.8 440 24.8
Migut.J01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.2e-07 60.8 409 23.2
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 3.2e-07 60.8 191 23.6
Migut.N02494 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.2e-07 60.5 423 24.6
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 7.1e-07 59.7 417 21.1
Hund02870 Selenicereus undatus HOM05D000576 ORTHO05D000368 7.1e-07 59.7 224 22.3
Aqoxy5G04063 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 9.3e-07 59.3 199 24.1
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 9.3e-07 59.3 409 24.0
Migut.G00965 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.3e-07 59.3 413 23.0
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.3e-07 59.3 423 23.6
TWI36G1072 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.3e-07 59.3 410 23.2
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 1.2e-06 58.9 435 23.2
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 1.6e-06 58.5 424 23.8
Migut.C01195 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-06 58.5 276 25.0
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.6e-06 58.5 216 27.3
Peaxi162Scf00166g00626 Petunia axillaris HOM05D013549 ORTHO05D000368 1.6e-06 58.5 152 32.9
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.6e-06 58.5 459 22.4
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 2.1e-06 58.2 479 22.1
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.1e-06 58.2 191 28.8
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.1e-06 58.2 194 28.9
Aqoxy5G04185 Aquilegia oxysepala HOM05D000015 ORTHO05D002445 2.7e-06 57.8 443 21.0
RcHm_v2.0_Chr3g0449571 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-06 57.8 421 21.9
CAN.G884.5 Capsicum annuum HOM05D013549 ORTHO05D000368 4.6e-06 57.0 235 27.7
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 4.6e-06 57.0 445 22.5
Gorai.004G137200 Gossypium raimondii HOM05D000576 ORTHO05D000368 4.6e-06 57.0 440 23.4
TWI53G1441 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 4.6e-06 57.0 45 55.6
Migut.J00888 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.0e-06 56.6 414 23.2
Peaxi162Scf00945g00015 Petunia axillaris HOM05D000576 ORTHO05D000368 6.0e-06 56.6 203 25.6
TWI38G1442 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 6.0e-06 56.6 46 54.3
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.0e-06 56.6 417 24.7
CAN.G206.200 Capsicum annuum HOM05D009846 ORTHO05D000368 7.9e-06 56.2 180 32.2
AUR62016586 Chenopodium quinoa HOM05D000576 ORTHO05D000368 7.9e-06 56.2 198 27.8


User provided reference genes

Program Settings