Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10555 Striga asiatica HOM05D000576 ORTHO05D000368 2.0e-308 1061.6 542 100.0
SGA_v2.0_scaffold24G10560 Striga asiatica HOM05D000576 ORTHO05D000368 9.6e-109 398.3 390 58.2
SGA_v2.0_scaffold196G40959 Striga asiatica HOM05D000576 ORTHO05D000368 5.6e-85 319.3 370 49.7
SGA_v2.0_scaffold118G32496 Striga asiatica HOM05D000576 ORTHO05D012667 7.6e-74 282.3 378 45.5
SGA_v2.0_scaffold287G47213 Striga asiatica HOM05D000576 ORTHO05D000368 2.5e-72 277.3 373 46.6
SGA_v2.0_scaffold11G05695 Striga asiatica HOM05D000576 ORTHO05D000368 3.1e-59 233.8 331 43.8
Migut.C01300 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.1e-51 205.7 346 37.0
Migut.C01282 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.5e-48 196.4 349 37.5
Migut.C01162 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.1e-47 193.0 377 36.6
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.0e-46 192.2 356 36.5
Migut.C01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-46 190.7 328 36.9
Migut.C01299 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-40 171.4 354 33.3
Migut.C01202 Erythranthe guttata HOM05D031909 ORTHO05D000368 1.0e-38 165.6 368 34.2
Migut.N03255 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.4e-35 154.5 342 34.8
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 1.4e-22 112.1 320 30.9
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 2.2e-20 104.8 315 28.6
Cc08_g15490 Coffea canephora HOM05D000576 ORTHO05D000368 9.2e-19 99.4 343 27.4
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.7e-18 97.8 323 28.8
CAN.G1156.42 Capsicum annuum HOM05D013549 ORTHO05D000368 1.0e-17 95.9 322 30.1
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.5e-16 91.3 277 28.5
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 5.6e-16 90.1 323 29.1
Os11g0533800 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D000368 5.6e-16 90.1 273 27.8
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 5.6e-16 90.1 274 26.3
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 7.3e-16 89.7 326 26.1
Rhsim02G0051900 Rhododendron simsii HOM05D000576 ORTHO05D015329 7.3e-16 89.7 196 29.1
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 7.3e-16 89.7 303 28.4
CAN.G337.7 Capsicum annuum HOM05D009846 ORTHO05D000368 9.5e-16 89.4 275 30.9
CAN.G337.8 Capsicum annuum HOM05D009846 ORTHO05D000368 9.5e-16 89.4 275 30.9
Migut.C01239 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.2e-15 89.0 133 36.1
COL.COLO4_27193 Corchorus olitorius HOM05D010825 ORTHO05D012667 2.8e-15 87.8 277 29.2
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 3.6e-15 87.4 359 26.2
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.6e-15 87.4 375 27.2
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 6.2e-15 86.7 360 26.4
Hund02870 Selenicereus undatus HOM05D000576 ORTHO05D000368 6.2e-15 86.7 312 25.6
CAN.G1156.32 Capsicum annuum HOM05D013549 ORTHO05D000368 8.0e-15 86.3 317 29.0
Migut.C01195 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-14 85.9 166 33.7
Cc05_g09460 Coffea canephora HOM05D009846 ORTHO05D000368 1.4e-14 85.5 293 28.0
Migut.C01193 Erythranthe guttata HOM05D031909 ORTHO05D000368 1.4e-14 85.5 182 35.2
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 2.3e-14 84.7 277 27.4
CAN.G1986.3 Capsicum annuum HOM05D013549 ORTHO05D000368 5.2e-14 83.6 333 27.6
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 1.2e-13 82.4 363 25.9
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.5e-13 82.0 334 27.5
Aqoxy7G03624 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 2.6e-13 81.3 270 27.0
Migut.C01235 Erythranthe guttata HOM05D013549 ORTHO05D000368 7.5e-13 79.7 131 35.9
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 7.5e-13 79.7 320 26.9
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 1.3e-12 79.0 254 29.1
Aqoxy5G04185 Aquilegia oxysepala HOM05D000015 ORTHO05D002445 2.2e-12 78.2 290 25.2
CAN.G1986.10 Capsicum annuum HOM05D013549 ORTHO05D000368 2.9e-12 77.8 292 29.5
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.7e-12 77.4 298 27.9
Aqoxy4G02514 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 6.4e-12 76.6 257 27.6
Peaxi162Scf00945g00015 Petunia axillaris HOM05D000576 ORTHO05D000368 6.4e-12 76.6 258 25.6
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.3e-12 76.3 274 28.1
Ciclev10008427m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.1e-11 75.9 248 27.8
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.4e-11 75.5 268 25.4
FvH4_1g04270 Fragaria vesca HOM05D000576 ORTHO05D000368 1.4e-11 75.5 291 25.4
COL.COLO4_14292 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.9e-11 75.1 259 26.3
Migut.J00218 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-11 75.1 288 26.7
Cc03_g00060 Coffea canephora HOM05D000576 ORTHO05D000368 3.2e-11 74.3 317 25.6
COL.COLO4_02841 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.0e-10 71.6 285 25.3
COL.COLO4_09859 Corchorus olitorius HOM05D010825 ORTHO05D012667 2.0e-10 71.6 253 29.6
CAN.G884.5 Capsicum annuum HOM05D013549 ORTHO05D000368 2.7e-10 71.2 236 28.8
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.7e-10 71.2 295 27.5
Prupe.5G181600 Prunus persica HOM05D000576 ORTHO05D000368 3.5e-10 70.9 256 27.3
Manes.17G000300 Manihot esculenta HOM05D000576 ORTHO05D000368 4.6e-10 70.5 303 28.4
COL.COLO4_27090 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.0e-10 70.1 269 25.3
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-09 69.3 323 23.2
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.0e-09 69.3 247 26.7
COL.COLO4_27089 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.3e-09 68.9 266 25.2
Os11g0532600 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D000368 2.3e-09 68.2 332 26.8
Aqoxy5G02891 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 3.9e-09 67.4 281 27.0
Os05g0538250 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D011164 5.0e-09 67.0 293 27.3
Os05g0531800 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D011164 6.6e-09 66.6 275 23.6
Gohir.A11G287923 Gossypium hirsutum HOM05D000576 ORTHO05D000368 8.6e-09 66.2 284 23.9
RcHm_v2.0_Chr2g0160731 Rosa chinensis HOM05D008065 ORTHO05D010197 8.6e-09 66.2 276 24.3
MD03G1208600 Malus domestica HOM05D003087 ORTHO05D003312 1.1e-08 65.9 310 24.5
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.1e-08 65.9 264 23.1
vmacro05628 Vaccinium macrocarpon HOM05D000006 ORTHO05D000001 1.5e-08 65.5 225 25.8
FAN05G2598 Fragaria x ananassa HOM05D008065 ORTHO05D010197 1.9e-08 65.1 272 23.9
FAN14G2415 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.5e-08 64.7 324 23.8
FvH4_6g43950 Fragaria vesca HOM05D008065 ORTHO05D010197 3.3e-08 64.3 276 23.9
Thecc.08G187100 Theobroma cacao HOM05D000576 ORTHO05D000368 4.3e-08 63.9 250 23.6
CiPaw.10G097300 Carya illinoinensis HOM05D000576 ORTHO05D000368 7.3e-08 63.2 266 25.9
Migut.J00790 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.3e-08 63.2 253 23.3
TWI63G0418 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 9.5e-08 62.8 273 25.6
Aqoxy4G00512 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 1.2e-07 62.4 260 22.7
Lj5A109G69 Lonicera japonica HOM05D000576 ORTHO05D000368 1.2e-07 62.4 254 25.2
COL.COLO4_13160 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.6e-07 62.0 292 24.0
Migut.J00162 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-07 62.0 249 25.3
Peaxi162Scf00066g01414 Petunia axillaris HOM05D000576 ORTHO05D000368 1.6e-07 62.0 256 25.0
COL.COLO4_36720 Corchorus olitorius HOM05D010825 ORTHO05D012667 2.8e-07 61.2 277 25.6
Peaxi162Scf00945g00016 Petunia axillaris HOM05D000576 ORTHO05D000368 4.7e-07 60.5 250 26.0
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 4.7e-07 60.5 292 29.1
TWI36G1072 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.7e-07 60.5 204 25.0
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 4.7e-07 60.5 247 26.7
Gorai.007G299300 Gossypium raimondii HOM05D000576 ORTHO05D000368 6.2e-07 60.1 248 26.2
Potri.014G039700 Populus trichocarpa HOM05D000312 ORTHO05D000221 8.1e-07 59.7 324 25.6
Peaxi162Scf00683g00240 Petunia axillaris HOM05D013549 ORTHO05D000368 1.1e-06 59.3 148 31.1
Migut.I01156 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.4e-06 58.9 282 25.2
Gohir.A11G267101 Gossypium hirsutum HOM05D000576 ORTHO05D000368 1.4e-06 58.9 247 25.9
Os07g0163200 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 1.4e-06 58.9 282 25.5
PSO478G2955 Papaver somniferum HOM05D000051 ORTHO05D000015 1.4e-06 58.9 282 25.9
Cc03_g02850 Coffea canephora HOM05D009846 ORTHO05D000368 3.1e-06 57.8 272 25.0
CAN.G473.66 Capsicum annuum HOM05D009846 ORTHO05D000002 4.0e-06 57.4 198 32.8
Os11g0539600 Oryza sativa ssp. japonica HOM05D015059 ORTHO05D000368 4.0e-06 57.4 301 24.3
Peaxi162Scf00045g01340 Petunia axillaris HOM05D000576 ORTHO05D000368 4.0e-06 57.4 257 24.5
TWI63G1035 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.0e-06 57.4 257 25.3
MBI18_g07596_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 8.9e-06 56.2 324 23.5
TWI31G0199 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 8.9e-06 56.2 250 23.6
TAR365G1029 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.9e-06 56.2 186 29.0


User provided reference genes

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