Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10540 Striga asiatica HOM05D000091 ORTHO05D402236 1.3e-57 226.1 109 100.0
Prupe.6G117000 Prunus persica HOM05D000091 ORTHO05D008877 3.0e-09 65.5 61 49.2
Gohir.A09G091800 Gossypium hirsutum HOM05D000091 ORTHO05D008877 6.6e-09 64.3 61 49.2
Gorai.006G108300 Gossypium raimondii HOM05D000091 ORTHO05D008877 1.1e-08 63.5 61 49.2
SalBow3G4425 Salvia bowleyana HOM05D000091 ORTHO05D008877 2.5e-08 62.4 61 50.8
Duzib168G0732 Durio zibethinus HOM05D000091 ORTHO05D008877 3.3e-08 62.0 61 49.2
MD11G1154700 Malus domestica HOM05D000091 ORTHO05D008877 4.3e-08 61.6 61 47.5
PGSC0003DMG400000434 Solanum tuberosum HOM05D000091 ORTHO05D008877 4.3e-08 61.6 61 47.5
MSTRG.17739 Avicennia marina HOM05D000091 ORTHO05D008877 5.6e-08 61.2 61 49.2
MD03G1132400 Malus domestica HOM05D000091 ORTHO05D008877 1.2e-07 60.1 61 45.9
AUR62015932 Chenopodium quinoa HOM05D000919 ORTHO05D001187 1.6e-07 59.7 45 64.4
Sopen11g026470 Solanum pennellii HOM05D000091 ORTHO05D008877 1.6e-07 59.7 61 45.9
MSTRG.21073 Avicennia marina HOM05D000091 ORTHO05D008877 2.1e-07 59.3 61 50.8
Migut.N02524 Erythranthe guttata HOM05D000091 ORTHO05D008877 2.1e-07 59.3 58 48.3
Oeu050169.1 Olea europaea HOM05D002379 ORTHO05D008877 2.1e-07 59.3 61 45.9
Oeu050170.1 Olea europaea HOM05D000091 ORTHO05D008877 2.1e-07 59.3 61 45.9
Solyc11g066730.2 Solanum lycopersicum HOM05D000091 ORTHO05D008877 2.1e-07 59.3 61 45.9
Sed0004475 Sechium edule HOM05D000091 ORTHO05D008877 3.6e-07 58.5 61 45.9
Peaxi162Scf00789g00113 Petunia axillaris HOM05D000091 ORTHO05D008877 6.2e-07 57.8 61 44.3
Dinv12536 Davidia involucrata HOM05D000091 ORTHO05D008877 8.0e-07 57.4 61 47.5
Thhalv10002437m.g Eutrema salsugineum HOM05D000091 ORTHO05D008877 8.0e-07 57.4 52 48.1
Gohir.A07G106900 Gossypium hirsutum HOM05D000091 ORTHO05D008877 8.0e-07 57.4 61 45.9
Gohir.D07G110800 Gossypium hirsutum HOM05D000091 ORTHO05D008877 8.0e-07 57.4 61 45.9
Gorai.001G119000 Gossypium raimondii HOM05D000091 ORTHO05D008877 8.0e-07 57.4 61 45.9
TWI31G1462 Tripterygium wilfordii HOM05D000091 ORTHO05D008877 1.1e-06 57.0 61 44.3
vmacro03228 Vaccinium macrocarpon HOM05D000091 ORTHO05D008877 1.4e-06 56.6 57 49.1
SGA_v2.0_scaffold93G28340 Striga asiatica HOM05D000091 ORTHO05D008877 1.8e-06 56.2 61 44.3
Atru.chr3.3404 Acer truncatum HOM05D000091 ORTHO05D008877 2.3e-06 55.8 61 44.3
Actinidia07203 Actinidia chinensis HOM05D000091 ORTHO05D008877 2.3e-06 55.8 61 44.3
ATR0820G172 Amborella trichopoda HOM05D000091 ORTHO05D008877 2.3e-06 55.8 60 43.3
COL.COLO4_19271 Corchorus olitorius HOM05D000091 ORTHO05D008877 2.3e-06 55.8 61 45.9
HanXRQChr01g0016731 Helianthus annuus HOM05D000091 ORTHO05D008877 2.3e-06 55.8 61 41.0
Potri.004G189800 Populus trichocarpa HOM05D000091 ORTHO05D008877 2.3e-06 55.8 61 44.3
Sabra09G0119300 Salix brachista HOM05D000091 ORTHO05D008877 2.3e-06 55.8 61 44.3
CAN.G644.43 Capsicum annuum HOM05D000091 ORTHO05D008877 3.1e-06 55.5 61 44.3
Sp5g16380 Schrenkiella parvula HOM05D000091 ORTHO05D008877 3.1e-06 55.5 60 41.7
Carub.0005s1057 Capsella rubella HOM05D000091 ORTHO05D008877 4.0e-06 55.1 53 45.3
CARHR151220 Cardamine hirsuta HOM05D000091 ORTHO05D008877 4.0e-06 55.1 60 41.7
Nitab4.5_0000442g0210 Nicotiana tabacum HOM05D000091 ORTHO05D008877 4.0e-06 55.1 61 41.0
Actinidia24172 Actinidia chinensis HOM05D000091 ORTHO05D008877 5.2e-06 54.7 61 44.3
EL10Ac9g21050 Beta vulgaris HOM05D000091 ORTHO05D008877 5.2e-06 54.7 56 48.2
Dinv29409 Davidia involucrata HOM05D000091 ORTHO05D008877 5.2e-06 54.7 61 44.3
AUR62031765 Chenopodium quinoa HOM05D000091 ORTHO05D008877 6.8e-06 54.3 56 48.2
Cc01_g09960 Coffea canephora HOM05D000091 ORTHO05D008877 6.8e-06 54.3 61 41.0
Manes.04G010500 Manihot esculenta HOM05D000091 ORTHO05D008877 6.8e-06 54.3 61 42.6
Potri.009G150500 Populus trichocarpa HOM05D000091 ORTHO05D008877 6.8e-06 54.3 61 42.6
THA.LOC104810891 Tarenaya hassleriana HOM05D000091 ORTHO05D008877 6.8e-06 54.3 60 41.7
QL01p014042 Quercus lobata HOM05D000091 ORTHO05D008877 8.9e-06 53.9 61 42.6


User provided reference genes

Program Settings