Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 2.0e-80 302.4 150 100.0
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.0e-44 182.2 174 56.9
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.3e-43 178.7 174 57.5
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.8e-41 172.9 174 53.4
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 5.4e-38 161.4 173 53.8
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 3.0e-36 155.6 158 57.6
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.5e-32 143.3 87 74.7
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 9.9e-32 140.6 217 42.4
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.3e-31 140.2 173 43.9
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.3e-31 140.2 224 40.2
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 8.4e-31 137.5 173 43.9
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 8.4e-31 137.5 225 40.9
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.1e-30 137.1 172 44.2
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 1.1e-30 137.1 174 46.0
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 4.2e-30 135.2 175 42.3
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 7.1e-30 134.4 173 42.8
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 7.1e-30 134.4 175 45.1
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 9.3e-30 134.0 174 45.4
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.3e-28 129.4 175 44.0
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.9e-28 128.6 111 58.6
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 5.1e-28 128.3 179 40.2
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 6.7e-28 127.9 173 43.9
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 1.9e-27 126.3 163 44.8
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.9e-27 126.3 171 43.3
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.5e-27 125.9 173 42.2
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 5.6e-27 124.8 170 41.2
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 7.4e-27 124.4 170 41.8
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.6e-26 123.2 173 38.2
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.1e-26 122.9 163 44.2
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 2.1e-26 122.9 171 39.8
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 3.7e-26 122.1 131 47.3
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 4.8e-26 121.7 169 42.6
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 4.8e-26 121.7 168 39.3
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 8.2e-26 120.9 154 42.9
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 1.1e-25 120.6 173 41.0
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 1.4e-25 120.2 88 61.4
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 2.4e-25 119.4 173 39.3
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 3.1e-25 119.0 179 40.2
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 3.1e-25 119.0 174 40.8
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 5.3e-25 118.2 173 39.3
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 6.9e-25 117.9 169 41.4
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.5e-24 116.7 173 43.9
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 2.0e-24 116.3 168 42.3
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.6e-24 115.9 173 38.2
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 3.4e-24 115.5 172 39.0
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 5.8e-24 114.8 167 38.9
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.7e-23 113.2 171 39.2
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.7e-23 113.2 171 39.2
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 2.2e-23 112.8 164 39.0
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 2.9e-23 112.5 170 39.4
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 6.5e-23 111.3 86 55.8
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 8.4e-23 110.9 172 39.5
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 1.1e-22 110.5 173 38.7
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 1.9e-22 109.8 170 34.7
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 3.2e-22 109.0 172 37.8
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 3.2e-22 109.0 181 38.7
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 5.5e-22 108.2 85 56.5
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 5.5e-22 108.2 172 37.2
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 5.5e-22 108.2 171 35.7
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 7.1e-22 107.8 172 39.0
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 7.1e-22 107.8 163 33.1
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 9.3e-22 107.5 170 36.5
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 9.3e-22 107.5 173 38.2
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 1.2e-21 107.1 85 54.1
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.2e-21 107.1 163 33.1
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 2.1e-21 106.3 169 38.5
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 2.7e-21 105.9 172 36.6
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 4.6e-21 105.1 172 38.4
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 4.6e-21 105.1 164 37.2
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 6.0e-21 104.8 163 38.7
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 1.0e-20 104.0 180 36.7
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 1.0e-20 104.0 180 36.7
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.0e-20 104.0 85 51.8
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 1.3e-20 103.6 163 37.4
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 2.3e-20 102.8 170 36.5
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 2.3e-20 102.8 172 36.6
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 5.1e-20 101.7 85 52.9
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 1.5e-19 100.1 169 37.3
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.9e-19 99.8 79 50.6
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 2.5e-19 99.4 86 50.0
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 3.3e-19 99.0 154 39.6
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 3.3e-19 99.0 154 39.6
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 3.3e-19 99.0 172 38.4
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 4.3e-19 98.6 168 35.7
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 4.3e-19 98.6 168 34.5
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 9.7e-19 97.4 169 36.1
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.6e-18 96.7 87 49.4
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 2.2e-18 96.3 166 33.1
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 2.8e-18 95.9 86 53.5
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 2.8e-18 95.9 197 32.5
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.8e-18 95.9 86 50.0
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 3.7e-18 95.5 86 46.5
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 8.2e-18 94.4 155 36.8
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 1.4e-17 93.6 172 35.5
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 1.8e-17 93.2 172 33.7
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 2.4e-17 92.8 169 32.0
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 4.1e-17 92.0 177 33.3
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 9.0e-17 90.9 88 54.5
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 9.0e-17 90.9 157 34.4
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 9.0e-17 90.9 154 37.0
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 1.5e-16 90.1 86 48.8
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 2.0e-16 89.7 157 33.1
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 2.0e-16 89.7 157 33.1
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 2.0e-16 89.7 86 45.3
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 1.0e-15 87.4 166 32.5
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 1.3e-15 87.0 86 46.5
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.3e-15 87.0 86 46.5
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 1.7e-15 86.7 88 44.3
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 3.8e-15 85.5 154 33.8
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 5.0e-15 85.1 160 36.2
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 1.1e-14 84.0 150 35.3
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 1.9e-14 83.2 154 35.1
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 2.5e-14 82.8 84 44.0
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 4.2e-14 82.0 147 32.0
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 5.5e-14 81.6 141 36.9
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 9.3e-14 80.9 165 30.9
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 2.7e-13 79.3 157 35.7
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 3.6e-13 79.0 66 50.0
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 4.6e-13 78.6 96 44.8
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.8e-12 76.6 133 32.3
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 2.3e-12 76.3 137 39.4
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.0e-12 75.9 150 34.7
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.5e-11 73.6 153 30.1
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.5e-11 73.6 60 50.0
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 3.3e-11 72.4 135 35.6
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 4.3e-11 72.0 132 34.8
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 4.3e-11 72.0 147 30.6
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 9.7e-11 70.9 89 39.3
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.7e-10 70.1 71 46.5
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 1.1e-09 67.4 136 34.6
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 1.5e-08 63.5 142 33.1
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 2.6e-08 62.8 159 28.3
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 1.3e-07 60.5 69 40.6
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 7.2e-06 54.7 65 41.5
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 9.4e-06 54.3 35 65.7


User provided reference genes

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