Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 5.1e-190 667.5 326 100.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.8e-158 562.8 321 85.4
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.5e-154 549.7 328 80.8
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.7e-153 546.2 328 79.6
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 3.2e-152 542.0 328 79.0
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.4e-150 536.6 327 77.7
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 6.7e-150 534.3 328 77.7
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 6.7e-150 534.3 327 78.3
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 6.7e-150 534.3 320 76.9
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 3.3e-149 531.9 328 77.4
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 5.7e-149 531.2 320 76.6
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 9.7e-149 530.4 328 76.2
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 9.7e-149 530.4 320 76.9
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.2e-148 529.3 319 76.8
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.8e-148 528.9 317 78.2
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.8e-148 528.9 317 78.2
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.8e-148 528.9 328 77.4
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 3.7e-148 528.5 322 78.0
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 3.7e-148 528.5 318 77.4
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.1e-147 526.9 322 77.3
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 6.9e-147 524.2 322 76.7
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 6.9e-147 524.2 328 75.9
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 9.1e-147 523.9 327 74.6
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 9.1e-147 523.9 328 76.2
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.2e-146 523.5 328 75.6
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.2e-146 523.5 329 76.0
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.5e-146 523.1 318 77.0
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 2.0e-146 522.7 326 77.6
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 2.6e-146 522.3 328 74.4
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.6e-146 522.3 321 76.0
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 7.7e-146 520.8 327 74.3
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.0e-145 520.4 322 73.9
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.0e-145 520.4 328 74.7
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 2.9e-145 518.8 328 75.0
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.9e-145 518.8 328 75.3
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 3.8e-145 518.5 328 73.8
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 5.0e-145 518.1 322 73.6
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 1.9e-144 516.2 318 75.8
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.9e-144 516.2 328 74.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 3.2e-144 515.4 328 73.8
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 5.5e-144 514.6 329 73.9
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 7.2e-144 514.2 328 75.0
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.1e-143 512.7 322 73.9
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 2.1e-143 512.7 328 73.8
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.7e-143 511.5 329 73.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 4.7e-143 511.5 328 72.6
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.0e-142 510.4 319 74.6
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.0e-142 510.4 318 73.0
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 3.0e-142 508.8 329 73.3
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 3.9e-142 508.4 329 72.9
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 8.8e-142 507.3 328 72.6
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 2.0e-141 506.1 329 72.3
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 4.4e-141 505.0 320 75.0
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 5.7e-141 504.6 329 72.9
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 7.4e-141 504.2 329 73.9
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 7.4e-141 504.2 328 72.9
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 2.2e-140 502.7 329 72.0
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 2.2e-140 502.7 345 70.4
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 2.2e-140 502.7 320 74.4
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 1.4e-139 500.0 343 70.3
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.8e-139 499.6 328 73.2
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 9.1e-139 497.3 340 70.6
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 3.5e-138 495.4 329 72.0
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.7e-138 494.2 328 72.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.7e-138 494.2 328 72.9
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.7e-137 493.0 329 72.3
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.9e-137 492.3 325 72.6
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.5e-136 490.0 325 72.9
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 2.5e-136 489.2 312 72.8
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 2.5e-136 489.2 341 71.3
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.2e-136 488.4 305 74.8
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 7.2e-136 487.6 325 69.8
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 7.2e-136 487.6 309 75.4
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.7e-135 485.7 330 68.8
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.7e-135 485.7 305 74.4
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 6.1e-135 484.6 328 71.0
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 3.0e-134 482.3 318 70.4
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.5e-133 479.9 305 73.4
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.6e-133 479.2 315 71.7
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 4.8e-132 474.9 320 70.0
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 6.3e-132 474.6 306 70.6
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 7.0e-131 471.1 326 69.3
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 3.5e-130 468.8 328 68.0
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 7.2e-128 461.1 312 72.4
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.0e-126 455.7 327 66.7
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 5.7e-125 451.4 319 70.8
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 3.1e-123 445.7 328 66.2
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 3.2e-120 435.6 253 79.4
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 2.8e-119 432.6 328 66.2
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 4.7e-119 431.8 306 66.0
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.0e-118 429.1 324 61.4
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.0e-118 428.7 324 61.4
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-116 423.7 255 77.6
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 8.3e-116 421.0 330 62.4
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.1e-115 420.6 254 78.7
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.1e-115 420.6 308 61.7
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.8e-115 419.9 256 77.7
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 2.8e-111 406.0 267 70.8
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.3e-108 397.1 254 74.4
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.8e-107 393.3 317 58.0
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 1.2e-106 390.6 309 59.5
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 5.2e-102 375.2 328 58.8
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 3.4e-101 372.5 228 74.6
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 6.8e-94 348.2 217 77.4
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.2e-93 347.4 198 82.8
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.1e-90 336.7 312 54.5
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 4.9e-68 262.3 158 70.3
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.8e-57 227.3 143 79.0
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.1e-51 208.0 132 75.8
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 3.3e-48 196.4 313 40.9
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 4.2e-43 179.5 144 56.9
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 2.3e-41 173.7 291 36.4
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 3.3e-40 169.9 114 67.5
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.1e-38 164.9 308 33.4
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.8e-31 139.4 113 67.3
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 3.4e-29 133.3 109 52.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 3.8e-28 129.8 133 54.1
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 9.4e-27 125.2 78 76.9
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.3e-24 116.7 68 70.6
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.9e-20 103.6 75 56.0
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 5.5e-19 99.4 58 75.9
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 1.7e-15 87.8 64 60.9
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.5e-12 75.9 65 58.5
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.1e-10 70.9 62 56.5
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 6.3e-07 59.3 40 65.0
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 7.0e-06 55.8 39 71.8


User provided reference genes

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