Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 4.6e-155 551.2 284 100.0
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.5e-116 423.3 276 79.7
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.7e-112 409.8 290 74.8
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 5.9e-110 401.4 287 74.2
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.2e-109 399.4 272 75.7
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 2.2e-109 399.4 272 75.7
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 4.7e-107 391.7 277 73.3
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.0e-106 390.6 272 73.9
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 4.0e-106 388.7 269 75.1
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 7.5e-105 384.4 275 72.0
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 8.3e-104 380.9 277 71.5
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.4e-103 380.2 272 72.4
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 2.0e-102 376.3 274 71.5
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.7e-102 375.9 276 68.5
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 4.5e-102 375.2 276 68.5
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 7.7e-102 374.4 282 69.9
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 1.3e-101 373.6 276 68.8
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.3e-101 372.9 272 71.7
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.3e-101 372.9 275 70.2
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 3.8e-101 372.1 274 69.7
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 6.6e-101 371.3 276 68.1
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 8.6e-101 370.9 276 67.8
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.1e-100 370.5 267 70.8
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.5e-100 370.2 264 72.3
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 3.3e-100 369.0 289 67.1
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 4.3e-100 368.6 259 73.0
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 7.2e-100 367.9 274 69.0
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 7.2e-100 367.9 284 69.0
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.2e-99 367.1 284 69.0
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.2e-99 367.1 284 69.0
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.1e-99 366.3 284 68.7
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 4.7e-99 365.2 272 68.8
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 6.1e-99 364.8 276 71.4
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 8.0e-99 364.4 265 71.7
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 8.0e-99 364.4 274 70.8
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.4e-98 363.6 289 66.8
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 3.0e-98 362.5 273 70.0
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 5.2e-98 361.7 294 66.0
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 6.8e-98 361.3 289 66.8
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 6.8e-98 361.3 284 68.0
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 8.9e-98 360.9 267 70.0
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 8.9e-98 360.9 279 66.3
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.5e-97 360.1 275 68.0
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 2.6e-97 359.4 289 66.8
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.6e-97 359.4 279 68.5
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 3.4e-97 359.0 262 71.8
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 3.4e-97 359.0 268 69.8
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 4.4e-97 358.6 275 68.7
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 4.4e-97 358.6 272 68.0
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 7.5e-97 357.8 261 71.3
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 9.8e-97 357.5 274 67.2
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.3e-96 357.1 278 68.0
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.7e-96 356.7 256 71.9
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 3.7e-96 355.5 270 69.6
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.7e-96 355.5 270 69.6
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.4e-95 353.6 261 70.9
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.4e-95 352.8 261 70.9
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.2e-95 352.4 257 71.2
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.2e-95 352.4 257 71.2
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 4.1e-95 352.1 276 67.8
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.2e-94 350.5 276 65.9
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.2e-94 350.5 270 68.9
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.7e-93 346.7 282 66.0
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 2.3e-93 346.3 268 66.0
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 6.6e-93 344.7 262 67.9
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 8.6e-93 344.4 270 64.4
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.1e-92 344.0 344 55.8
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.5e-92 343.6 278 67.3
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.5e-92 343.6 279 64.9
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 5.6e-92 341.7 276 65.2
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 1.2e-91 340.5 279 64.5
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.6e-91 339.0 276 66.7
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 8.9e-90 334.3 273 63.7
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.5e-89 333.6 278 63.3
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 2.6e-89 332.8 288 61.1
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.7e-88 330.1 265 65.7
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 2.9e-88 329.3 288 60.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 2.9e-88 329.3 274 63.5
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 3.7e-88 328.9 279 63.4
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.1e-87 327.4 286 60.5
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.1e-87 327.4 269 65.1
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 1.9e-87 326.6 283 61.8
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 2.4e-87 326.2 256 68.0
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 3.2e-87 325.9 282 63.1
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.6e-86 323.6 261 62.8
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 3.6e-83 312.4 287 63.4
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.6e-83 312.4 277 63.9
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 5.4e-79 298.5 262 61.5
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 9.5e-76 287.7 265 59.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.2e-70 270.8 192 71.9
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 5.1e-69 265.4 169 79.3
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 4.0e-66 255.8 187 75.4
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.4e-65 252.3 173 74.6
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.6e-62 243.8 269 51.7
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.7e-62 243.0 178 70.2
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 4.9e-56 222.2 273 44.3
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 4.6e-54 215.7 281 46.6
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.3e-53 214.2 137 77.4
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 2.5e-52 209.9 170 64.7
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 3.3e-52 209.5 170 65.9
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.3e-48 197.6 257 46.7
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.3e-48 197.6 274 44.9
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.6e-46 189.1 159 64.8
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 7.4e-44 181.8 175 56.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.7e-40 170.6 263 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.2e-39 166.0 216 44.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 4.2e-39 166.0 277 41.2
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.5e-36 157.5 138 61.6
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.5e-28 130.2 269 34.6
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 2.4e-26 123.6 92 62.0
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.4e-23 114.4 164 42.1
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 7.2e-23 112.1 81 66.7
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.6e-22 109.8 78 74.4
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.3e-20 102.8 173 40.5
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 2.2e-19 100.5 78 65.4
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.4e-18 97.1 65 70.8
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.8e-13 80.9 69 59.4
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 1.1e-12 78.2 72 55.6
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.7e-11 73.2 156 35.3


User provided reference genes

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