Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 1.7e-163 579.3 296 100.0
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.1e-130 470.3 329 75.7
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 2.9e-128 462.2 322 76.7
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 6.4e-123 444.5 322 75.5
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 1.2e-121 440.3 349 69.6
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.7e-120 436.4 326 70.2
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.7e-120 436.4 327 70.9
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 3.9e-120 435.3 323 70.3
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 3.9e-120 435.3 326 70.2
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 3.9e-120 435.3 327 73.1
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 2.5e-119 432.6 327 70.3
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 4.3e-119 431.8 313 73.8
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 7.3e-119 431.0 323 71.8
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.6e-118 429.9 323 69.3
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.1e-118 429.5 311 74.3
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 6.2e-118 427.9 322 73.6
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 2.3e-117 426.0 311 74.3
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.2e-116 423.7 315 73.3
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 1.5e-116 423.3 327 70.0
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 3.4e-116 422.2 327 69.1
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 5.8e-116 421.4 341 67.2
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 9.8e-116 420.6 323 70.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 1.3e-115 420.2 323 69.7
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 2.9e-115 419.1 322 70.8
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 3.7e-115 418.7 321 70.4
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.4e-114 416.8 301 72.1
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 1.4e-114 416.8 321 69.5
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 3.2e-114 415.6 323 70.0
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 4.1e-114 415.2 313 72.5
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 5.4e-114 414.8 321 69.2
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 5.4e-114 414.8 321 69.2
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 9.2e-114 414.1 323 70.6
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 2.0e-113 412.9 302 70.5
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 2.0e-113 412.9 325 71.4
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.5e-113 412.1 290 71.7
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 3.5e-113 412.1 328 69.8
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 6.0e-113 411.4 305 73.1
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.0e-112 410.6 326 69.6
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 1.3e-112 410.2 301 73.4
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 1.7e-112 409.8 321 69.2
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 3.0e-112 409.1 322 69.3
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 3.9e-112 408.7 321 70.7
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 3.9e-112 408.7 306 73.5
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 3.9e-112 408.7 320 70.3
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 5.0e-112 408.3 324 70.4
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 1.1e-111 407.1 262 80.5
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.5e-111 406.0 323 68.1
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 2.5e-111 406.0 323 68.1
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 3.3e-111 405.6 271 76.4
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 7.3e-111 404.4 326 68.4
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 7.3e-111 404.4 327 69.4
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.2e-110 403.7 338 68.0
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.2e-110 403.7 319 66.8
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 2.8e-110 402.5 323 67.5
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 3.6e-110 402.1 293 74.4
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 4.7e-110 401.7 325 68.3
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 4.7e-110 401.7 328 68.3
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 6.2e-110 401.4 328 68.3
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 1.8e-109 399.8 327 68.5
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.5e-108 396.7 327 68.2
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.4e-108 395.2 274 77.0
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-107 393.7 309 67.6
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-107 393.7 309 67.6
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.9e-107 392.5 319 69.3
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 3.7e-107 392.1 275 76.0
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 3.7e-107 392.1 325 68.0
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 6.4e-107 391.3 251 84.5
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 1.9e-106 389.8 274 73.0
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 1.9e-106 389.8 327 67.0
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 2.4e-106 389.4 261 74.7
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 2.4e-106 389.4 323 67.5
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 4.1e-106 388.7 322 65.5
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 5.4e-106 388.3 325 67.7
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 9.2e-106 387.5 323 68.1
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.1e-105 386.3 325 67.4
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 3.5e-105 385.6 326 66.0
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 1.0e-104 384.0 320 67.5
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.3e-104 383.6 325 66.2
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 1.7e-104 383.3 277 75.5
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.3e-104 382.9 321 65.4
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 5.1e-104 381.7 331 65.0
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 8.6e-104 380.9 293 69.3
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.1e-103 380.6 303 70.0
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.1e-103 380.6 322 66.5
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 1.9e-103 379.8 326 66.3
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.5e-103 379.4 322 66.8
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 9.5e-103 377.5 327 66.4
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 1.2e-102 377.1 323 66.6
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.2e-102 377.1 323 66.6
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.2e-102 377.1 322 66.1
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 1.2e-102 377.1 255 74.5
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 1.1e-101 374.0 320 66.6
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 1.4e-101 373.6 289 67.5
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 1.4e-101 373.6 322 65.5
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 1.8e-101 373.2 300 69.3
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 2.3e-101 372.9 313 67.4
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.1e-101 372.5 292 66.1
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 5.2e-101 371.7 277 72.2
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 1.5e-100 370.2 322 65.8
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 1.5e-100 370.2 257 72.4
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 2.0e-100 369.8 320 66.2
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 7.6e-100 367.9 271 69.7
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 2.2e-99 366.3 292 68.5
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 4.9e-99 365.2 252 71.0
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 5.4e-98 361.7 227 78.9
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 9.2e-98 360.9 327 64.8
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 1.6e-97 360.1 283 66.8
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 2.1e-97 359.8 282 64.9
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 4.6e-97 358.6 292 69.5
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 7.8e-97 357.8 255 74.5
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 7.8e-97 357.8 255 74.5
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.0e-96 357.5 273 66.7
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 3.0e-96 355.9 255 75.7
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.9e-96 355.5 219 79.9
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 7.3e-95 351.3 302 63.9
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 3.1e-93 345.9 252 69.0
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 1.7e-91 340.1 281 63.7
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 3.8e-91 339.0 312 62.8
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.1e-86 323.2 204 78.4
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 2.4e-85 319.7 325 58.5
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.0e-77 292.4 238 68.1
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 2.1e-73 280.0 182 78.0
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 2.3e-72 276.6 293 52.6
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 2.5e-71 273.1 262 55.0
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 5.6e-71 271.9 231 59.7
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.6e-70 270.4 232 60.3
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 2.1e-70 270.0 228 66.2
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 2.8e-70 269.6 261 54.4
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.8e-70 268.9 209 63.2
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 8.1e-70 268.1 209 63.2
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 8.1e-70 268.1 209 63.2
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 4.0e-69 265.8 232 58.6
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 9.0e-69 264.6 252 53.6
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-68 264.2 261 53.3
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 2.6e-68 263.1 173 76.9
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 5.8e-68 261.9 209 61.7
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 1.7e-67 260.4 209 61.2
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 7.1e-66 255.0 170 78.2
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 2.7e-65 253.1 225 57.8
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 3.7e-62 242.7 185 67.0
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.7e-59 233.8 198 58.6
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 3.2e-58 229.6 180 62.8
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 3.0e-56 223.0 180 61.7
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 1.5e-55 220.7 155 71.0
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 5.5e-50 202.2 161 60.9
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-48 196.8 176 56.8
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 1.8e-45 187.2 170 57.1
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.1e-45 186.4 265 44.5
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 5.0e-43 179.1 100 85.0
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-42 177.6 169 60.9
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 1.2e-41 174.5 229 51.1
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 4.7e-41 172.6 100 82.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 7.9e-41 171.8 176 52.8
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 2.2e-38 163.7 77 98.7
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 5.3e-37 159.1 160 55.6
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 5.9e-36 155.6 108 70.4
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.4e-32 144.4 76 85.5
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 2.2e-30 137.1 217 39.6
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.0e-28 130.6 128 56.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 1.4e-24 117.9 104 63.5
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 4.0e-24 116.3 211 36.5
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 7.7e-20 102.1 121 49.6
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 1.7e-19 100.9 179 38.5
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 2.8e-14 83.6 77 62.3
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 2.8e-14 83.6 77 62.3
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 7.0e-13 79.0 102 42.2
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 8.6e-11 72.0 95 54.7
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.6e-09 67.8 76 50.0
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 1.4e-08 64.7 73 50.7


User provided reference genes

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