Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 2.8e-196 688.3 331 100.0
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 1.2e-183 646.4 318 97.5
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 1.8e-134 483.0 286 81.8
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 5.4e-123 444.9 317 71.3
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 1.1e-46 191.4 322 38.8
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 1.6e-42 177.6 337 36.8
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 5.4e-38 162.5 345 33.3
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 5.6e-27 125.9 325 27.7
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.2e-26 124.8 311 29.9
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 8.1e-26 122.1 312 30.4
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.8e-25 120.9 317 30.9
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 3.4e-24 116.7 313 28.4
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 2.9e-23 113.6 313 27.8
SGA_v2.0_scaffold24G10326 Striga asiatica HOM05D011758 ORTHO05D006294 1.9e-22 110.9 128 49.2
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.1e-20 102.8 315 27.6
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 6.6e-20 102.4 311 27.7
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 6.6e-20 102.4 312 27.2
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 5.6e-19 99.4 311 26.7
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 1.6e-18 97.8 111 45.9
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 4.7e-18 96.3 310 29.4
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.7e-18 96.3 314 27.7
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.9e-17 92.0 304 28.6
SGA_v2.0_scaffold24G10321 Striga asiatica HOM05D011758 ORTHO05D006294 1.2e-16 91.7 123 45.5
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.0e-16 90.9 316 25.0
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 4.4e-16 89.7 316 25.6
SGA_v2.0_scaffold24G10382 Striga asiatica HOM05D011758 ORTHO05D006294 2.2e-15 87.4 105 51.4
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 4.9e-15 86.3 299 25.1
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 6.4e-15 85.9 317 26.2
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 8.4e-15 85.5 321 24.9
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 1.4e-14 84.7 310 26.5
SGA_v2.0_scaffold69G23067 Striga asiatica HOM05D007354 ORTHO05D006294 3.2e-14 83.6 321 29.3
EL10As4g23465 Beta vulgaris HOM05D003035 ORTHO05D000440 4.2e-14 83.2 310 26.5
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 4.2e-14 83.2 320 25.0
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 1.6e-13 81.3 293 26.3
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.6e-13 79.7 276 25.4
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.0e-12 78.6 277 24.5
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.0e-12 77.0 334 24.3
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 6.6e-12 75.9 318 24.8
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.7e-12 75.5 324 25.0
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 1.9e-11 74.3 329 24.6
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 9.6e-11 72.0 317 24.6
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 3.1e-09 67.0 329 23.4
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 6.9e-09 65.9 312 22.1
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 2.0e-08 64.3 331 23.0
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 2.6e-08 63.9 86 38.4
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 2.6e-08 63.9 278 25.2
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 3.4e-08 63.5 251 23.5
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 3.4e-08 63.5 262 25.6
SGA_v2.0_scaffold48G17988 Striga asiatica HOM05D011758 ORTHO05D006294 5.8e-08 62.8 107 37.4
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 7.6e-08 62.4 100 32.0
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 9.9e-08 62.0 180 30.0
Manes.01G063700 Manihot esculenta HOM05D000151 ORTHO05D000074 2.2e-07 60.8 129 33.3
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.2e-07 60.8 355 23.9
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 2.9e-07 60.5 337 22.0
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-06 58.5 367 22.6
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 3.2e-06 57.0 253 26.1


User provided reference genes

Program Settings