Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10404 Striga asiatica HOM05D011758 ORTHO05D000440 1.9e-71 272.3 130 100.0
SGA_v2.0_scaffold24G10400 Striga asiatica HOM05D001286 ORTHO05D000440 8.0e-62 240.4 130 91.5
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 2.8e-46 188.7 127 78.0
Migut.G01131 Erythranthe guttata HOM05D003035 ORTHO05D000440 2.7e-17 92.4 120 42.5
Migut.C01004 Erythranthe guttata HOM05D003035 ORTHO05D000440 7.8e-17 90.9 115 42.6
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 5.6e-15 84.7 54 75.9
SGA_v2.0_scaffold24G10323 Striga asiatica HOM05D001286 ORTHO05D000440 2.6e-12 75.9 89 50.6
SGA_v2.0_scaffold24G10329 Striga asiatica HOM05D001286 ORTHO05D000440 2.9e-11 72.4 121 43.0
SGA_v2.0_scaffold52G18942 Striga asiatica HOM05D001286 ORTHO05D000440 1.9e-10 69.7 121 39.7
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 4.6e-09 65.1 94 39.4
vmacro19720 Vaccinium macrocarpon HOM05D001286 ORTHO05D000440 4.6e-09 65.1 93 38.7
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 7.8e-09 64.3 87 42.5
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 1.0e-08 63.9 114 34.2
QL08p010298 Quercus lobata HOM05D003035 ORTHO05D000440 1.3e-08 63.5 114 34.2
Rhsim08G0204600 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.5e-07 60.1 98 35.7
Rhsim08G0205000 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.5e-07 60.1 98 35.7
Rhsim10G0179200 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.5e-07 60.1 109 33.9
Hma1.2p1_1067F.1_g253960 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 5.6e-07 58.2 89 33.7
Lj9C37G0 Lonicera japonica HOM05D003035 ORTHO05D000440 5.6e-07 58.2 118 33.1
Rhsim08G0205300 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.6e-07 58.2 98 34.7
PSO017G2407 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-06 57.0 113 32.7
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 1.6e-06 56.6 67 38.8
Hund25002 Selenicereus undatus HOM05D003035 ORTHO05D000440 2.8e-06 55.8 89 36.0
TAR627G0263 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.6e-06 55.5 89 34.8
TAR627G1148 Trochodendron aralioides HOM05D003035 ORTHO05D000440 3.6e-06 55.5 89 34.8
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 8.1e-06 54.3 74 37.8


User provided reference genes

Program Settings