Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 5.2e-192 674.1 315 100.0
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 5.3e-152 541.2 312 83.3
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 1.2e-124 450.3 317 71.3
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 1.2e-122 443.7 313 70.9
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 9.3e-48 194.9 321 40.8
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 2.9e-41 173.3 327 34.6
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.1e-35 154.8 327 31.5
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 6.3e-28 129.0 311 31.8
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.5e-26 124.4 311 31.2
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 2.1e-23 114.0 309 29.1
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 2.1e-23 114.0 311 27.7
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 1.0e-22 111.7 309 28.2
SGA_v2.0_scaffold24G10326 Striga asiatica HOM05D011758 ORTHO05D006294 1.0e-22 111.7 128 49.2
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 8.8e-22 108.6 307 28.3
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 8.8e-22 108.6 315 27.3
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 9.7e-21 105.1 314 27.1
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.4e-19 101.3 307 29.0
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.6e-18 97.8 306 27.5
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 2.6e-18 97.1 279 27.6
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 7.7e-18 95.5 93 50.5
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.0e-17 95.1 309 25.9
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.0e-17 92.8 317 24.6
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 6.5e-17 92.4 306 27.1
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 1.9e-16 90.9 306 28.1
EL10As4g23465 Beta vulgaris HOM05D003035 ORTHO05D000440 9.4e-16 88.6 328 26.2
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.2e-15 88.2 298 25.5
SGA_v2.0_scaffold24G10321 Striga asiatica HOM05D011758 ORTHO05D006294 1.2e-15 88.2 119 42.9
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.6e-15 87.8 312 24.4
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 1.6e-15 87.8 310 27.1
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 2.7e-15 87.0 302 26.5
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 6.1e-15 85.9 315 25.4
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 8.0e-15 85.5 271 26.9
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 8.0e-15 85.5 311 26.4
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.4e-14 84.7 314 24.8
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 1.4e-14 84.7 317 26.8
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.8e-14 84.3 320 24.1
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.0e-14 83.2 284 28.5
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 4.4e-13 79.7 316 26.6
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 4.4e-13 79.7 307 25.1
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 9.7e-13 78.6 288 26.4
SGA_v2.0_scaffold24G10382 Striga asiatica HOM05D011758 ORTHO05D006294 9.7e-13 78.6 105 46.7
SGA_v2.0_scaffold69G23067 Striga asiatica HOM05D007354 ORTHO05D006294 9.7e-13 78.6 314 28.7
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.3e-12 78.2 317 25.6
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 6.3e-12 75.9 316 24.7
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.3e-12 75.9 330 23.6
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 8.2e-12 75.5 276 25.4
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 1.1e-11 75.1 314 23.2
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 9.1e-11 72.0 266 24.8
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 3.5e-10 70.1 117 36.8
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 5.9e-10 69.3 336 21.1
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.0e-09 68.6 277 24.2
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 1.0e-09 68.6 253 25.3
SGA_v2.0_scaffold48G17988 Striga asiatica HOM05D011758 ORTHO05D006294 3.8e-09 66.6 85 43.5
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 1.9e-08 64.3 81 40.7
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 1.9e-08 64.3 314 21.3
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 5.5e-08 62.8 180 30.6
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.2e-08 62.4 331 21.1
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.2e-07 61.6 260 23.8
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.7e-07 60.5 356 22.2
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 4.7e-07 59.7 226 27.4
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.0e-06 58.5 92 33.7
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 6.8e-06 55.8 83 32.5
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 8.8e-06 55.5 159 29.6


User provided reference genes

Program Settings