Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10379 Striga asiatica HOM05D063356 ORTHO05D004127 5.1e-57 224.2 112 100.0
SGA_v2.0_scaffold46G17416 Striga asiatica HOM05D063356 ORTHO05D406622 9.3e-43 176.8 116 80.2
SGA_v2.0_scaffold173G39185 Striga asiatica HOM05D000141 ORTHO05D001860 1.3e-12 76.6 38 94.7
SGA_v2.0_scaffold60G20894 Striga asiatica HOM05D003873 ORTHO05D004127 2.0e-08 62.8 75 48.0
CiPaw.02G198500 Carya illinoinensis HOM05D003873 ORTHO05D004127 1.3e-07 60.1 75 45.3
MSTRG.11983 Avicennia marina HOM05D000141 ORTHO05D001860 2.8e-07 58.9 121 37.2
Migut.F00602 Erythranthe guttata HOM05D003873 ORTHO05D004127 3.7e-07 58.5 75 44.0
MSTRG.8896 Avicennia marina HOM05D003873 ORTHO05D004127 4.8e-07 58.2 88 42.0
SGA_v2.0_scaffold96G28934 Striga asiatica HOM05D000141 ORTHO05D001860 4.8e-07 58.2 34 79.4
Ciclev10032511m.g Citrus clementina HOM05D003873 ORTHO05D004127 6.3e-07 57.8 75 42.7
Oeu004079.1 Olea europaea HOM05D003873 ORTHO05D004127 6.3e-07 57.8 82 40.2
Atru.chr3.3508 Acer truncatum HOM05D003873 ORTHO05D004127 8.3e-07 57.4 75 44.0
Atru.chr3.3515 Acer truncatum HOM05D003873 ORTHO05D004127 8.3e-07 57.4 75 44.0
ClCG07G005060 Citrullus lanatus HOM05D003873 ORTHO05D004127 8.3e-07 57.4 75 44.0
MELO3C020142.2 Cucumis melo HOM05D003873 ORTHO05D004127 8.3e-07 57.4 75 44.0
CsaV3_5G010890 Cucumis sativus L. HOM05D003873 ORTHO05D004127 8.3e-07 57.4 75 44.0
Rhsim09G0185200 Rhododendron simsii HOM05D003873 ORTHO05D004127 1.8e-06 56.2 75 41.3
Sc11g0005790 Simmondsia chinensis HOM05D003873 ORTHO05D004127 1.8e-06 56.2 75 42.7
Dinv34475 Davidia involucrata HOM05D003873 ORTHO05D004127 2.4e-06 55.8 75 40.0
Lj8A55T86 Lonicera japonica HOM05D003873 ORTHO05D004127 2.4e-06 55.8 75 41.3
Oeu027748.1 Olea europaea HOM05D003873 ORTHO05D004127 2.4e-06 55.8 75 41.3
Cfa001222 Carpinus fangiana HOM05D003873 ORTHO05D004127 3.1e-06 55.5 75 41.3
Manes.10G000700 Manihot esculenta HOM05D003873 ORTHO05D004127 4.1e-06 55.1 50 56.0
CSS0018140 Camellia sinensis var. sinensis HOM05D003873 ORTHO05D004127 5.4e-06 54.7 75 40.0
AUR62030624 Chenopodium quinoa HOM05D003873 ORTHO05D004127 5.4e-06 54.7 75 40.0
PGR044G2565 Punica granatum HOM05D003873 ORTHO05D004127 5.4e-06 54.7 75 38.7
Dinv21841 Davidia involucrata HOM05D003873 ORTHO05D004127 7.0e-06 54.3 75 40.0
Eucgr.J00121 Eucalyptus grandis HOM05D003873 ORTHO05D004127 7.0e-06 54.3 75 41.3
QL08p064588 Quercus lobata HOM05D003873 ORTHO05D004127 9.1e-06 53.9 75 41.3
vmacro09968 Vaccinium macrocarpon HOM05D003873 ORTHO05D004127 9.1e-06 53.9 75 40.0


User provided reference genes

Program Settings