Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 2.4e-184 648.7 318 100.0
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 2.1e-100 369.8 245 77.1
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 4.9e-97 358.6 245 74.3
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 9.3e-88 327.8 242 71.1
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.2e-87 327.4 247 69.2
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 7.9e-87 324.7 242 70.7
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 7.9e-87 324.7 246 69.5
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.3e-86 323.9 279 63.1
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.3e-86 323.9 213 75.1
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 8.7e-86 321.2 230 73.9
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.5e-85 320.5 213 75.6
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 2.5e-85 319.7 243 67.9
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 5.6e-85 318.5 247 68.8
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.3e-84 317.4 245 68.6
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 2.1e-84 316.6 250 66.8
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 2.1e-84 316.6 225 72.0
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 3.7e-84 315.8 229 69.9
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 6.2e-84 315.1 247 68.0
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 6.2e-84 315.1 233 69.1
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.8e-83 313.5 209 73.7
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.8e-83 313.5 229 69.4
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.4e-83 313.2 233 68.2
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 4.0e-83 312.4 216 73.6
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 6.9e-83 311.6 188 79.8
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 6.9e-83 311.6 229 69.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 6.9e-83 311.6 245 66.1
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 9.0e-83 311.2 245 66.1
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.2e-82 310.8 239 70.3
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.5e-82 310.5 245 66.5
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 2.6e-82 309.7 249 66.7
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.6e-82 309.7 185 80.5
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 7.6e-82 308.1 185 79.5
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.0e-81 307.8 212 73.1
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 2.2e-81 306.6 248 66.1
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 2.2e-81 306.6 216 69.9
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 2.2e-81 306.6 233 68.7
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 2.2e-81 306.6 239 66.9
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 2.9e-81 306.2 247 66.0
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 3.8e-81 305.8 240 67.1
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 4.9e-81 305.4 248 65.3
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 4.9e-81 305.4 211 72.0
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 6.5e-81 305.1 247 65.6
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 8.4e-81 304.7 214 73.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 8.4e-81 304.7 185 79.5
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.1e-80 304.3 239 64.4
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 1.1e-80 304.3 201 74.6
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.4e-80 303.9 239 63.6
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 1.9e-80 303.5 191 77.5
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.9e-80 303.5 212 72.2
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.9e-80 303.5 215 71.6
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.9e-80 303.5 236 67.4
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 2.5e-80 303.1 239 64.4
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.5e-80 303.1 239 64.4
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 2.5e-80 303.1 242 66.1
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 2.5e-80 303.1 199 75.4
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.5e-80 303.1 212 71.7
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 2.5e-80 303.1 196 76.0
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.2e-80 302.8 231 68.4
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 3.2e-80 302.8 245 65.7
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 3.2e-80 302.8 228 67.1
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 7.1e-80 301.6 244 65.6
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.2e-79 300.8 189 75.7
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 2.7e-79 299.7 245 63.3
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 4.6e-79 298.9 227 65.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 4.6e-79 298.9 183 79.2
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.0e-78 297.7 246 64.2
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.3e-78 297.4 213 71.8
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.3e-78 297.4 186 77.4
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 2.3e-78 296.6 185 77.3
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.3e-78 296.6 246 64.6
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 8.7e-78 294.7 186 75.8
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 3.3e-77 292.7 186 74.7
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 3.3e-77 292.7 213 68.5
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 1.6e-76 290.4 263 60.8
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.7e-76 289.3 259 61.8
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 4.8e-76 288.9 186 74.7
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 6.3e-76 288.5 185 75.1
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 8.2e-76 288.1 186 74.7
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.8e-73 279.3 218 66.5
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 3.8e-73 279.3 184 72.3
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.4e-70 270.8 224 59.8
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 1.4e-67 260.8 206 67.0
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 2.4e-67 260.0 188 70.2
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 5.9e-66 255.4 208 63.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.0e-65 254.6 191 66.5
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 6.5e-65 251.9 183 64.5
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.2e-64 249.6 176 66.5
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.1e-63 246.9 185 67.0
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 2.7e-63 246.5 190 65.8
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 3.6e-63 246.1 207 60.9
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.8e-62 243.8 182 63.2
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 5.1e-62 242.3 166 66.3
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.8e-59 233.8 236 56.4
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 4.1e-59 232.6 208 59.1
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.1e-56 224.6 141 78.0
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.2e-56 221.9 233 54.9
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 9.4e-56 221.5 232 57.3
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.3e-49 201.1 128 75.0
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 5.5e-48 195.7 138 68.8
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 1.6e-47 194.1 186 55.9
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 6.7e-46 188.7 145 62.8
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 5.3e-43 179.1 146 63.0
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 2.7e-42 176.8 193 47.7
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 1.2e-39 167.9 200 50.0
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 3.7e-36 156.4 103 69.9
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.0e-34 150.6 105 67.6
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.3e-30 137.1 141 49.6
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 1.7e-25 120.9 87 70.1
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 1.5e-24 117.9 168 43.5
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.3e-20 104.8 60 76.7
SGA_v2.0_scaffold24G10400 Striga asiatica HOM05D001286 ORTHO05D000440 6.0e-18 95.9 61 75.4
SGA_v2.0_scaffold24G10358 Striga asiatica HOM05D007108 ORTHO05D000440 1.1e-16 91.7 49 85.7
SGA_v2.0_scaffold24G10404 Striga asiatica HOM05D011758 ORTHO05D000440 8.0e-15 85.5 54 75.9
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 8.9e-14 82.0 51 76.5
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 2.8e-07 60.5 61 54.1


User provided reference genes

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