Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10360 Striga asiatica HOM05D002426 ORTHO05D404499 1.8e-94 349.4 190 100.0
Migut.N03049 Erythranthe guttata HOM05D002426 ORTHO05D002873 2.5e-11 73.2 60 68.3
SGA_v2.0_scaffold25G11009 Striga asiatica HOM05D002426 ORTHO05D002873 4.2e-11 72.4 60 66.7
MSTRG.22047 Avicennia marina HOM05D002426 ORTHO05D002873 7.2e-11 71.6 60 68.3
Dinv24777 Davidia involucrata HOM05D002426 ORTHO05D002873 3.0e-09 66.2 60 61.7
SalBow6G4825 Salvia bowleyana HOM05D002426 ORTHO05D002873 5.1e-09 65.5 60 65.0
DCAR_027507 Daucus carota HOM05D002426 ORTHO05D002873 6.7e-09 65.1 60 60.0
Peaxi162Scf00169g00064 Petunia axillaris HOM05D002426 ORTHO05D002873 6.7e-09 65.1 60 63.3
CAN.G566.25 Capsicum annuum HOM05D002426 ORTHO05D002873 8.8e-09 64.7 60 61.7
TWI15G0101 Tripterygium wilfordii HOM05D002426 ORTHO05D002873 1.1e-08 64.3 60 61.7
Ciclev10018983m.g Citrus clementina HOM05D002426 ORTHO05D002873 1.5e-08 63.9 60 60.0
Haze_11160 Corylus avellana HOM05D002426 ORTHO05D002873 1.5e-08 63.9 60 60.0
Nitab4.5_0001704g0120 Nicotiana tabacum HOM05D002426 ORTHO05D002873 1.5e-08 63.9 60 60.0
Nitab4.5_0002356g0030 Nicotiana tabacum HOM05D002426 ORTHO05D002873 1.5e-08 63.9 60 60.0
vmacro00712 Vaccinium macrocarpon HOM05D002426 ORTHO05D002873 1.5e-08 63.9 60 61.7
Actinidia28970 Actinidia chinensis HOM05D002426 ORTHO05D002873 2.6e-08 63.2 60 61.7
Oeu007684.2 Olea europaea HOM05D002426 ORTHO05D002873 2.6e-08 63.2 60 60.0
Oeu050310.1 Olea europaea HOM05D002426 ORTHO05D002873 3.3e-08 62.8 60 60.0
Sopen12g032630 Solanum pennellii HOM05D002426 ORTHO05D002873 3.3e-08 62.8 60 60.0
TAR362G1231 Trochodendron aralioides HOM05D002426 ORTHO05D002873 4.4e-08 62.4 60 58.3
CSS0001320 Camellia sinensis var. sinensis HOM05D002426 ORTHO05D002873 5.7e-08 62.0 60 61.7
CSS0009891 Camellia sinensis var. sinensis HOM05D002426 ORTHO05D002873 5.7e-08 62.0 60 60.0
CSS0036901 Camellia sinensis var. sinensis HOM05D002426 ORTHO05D002873 5.7e-08 62.0 60 60.0
CSS0025776 Camellia sinensis var. sinensis HOM05D002426 ORTHO05D002873 9.7e-08 61.2 60 61.7
Cpa.g.sc250.16 Carica papaya HOM05D002426 ORTHO05D002873 9.7e-08 61.2 60 55.0
ClCG09G013710 Citrullus lanatus HOM05D002426 ORTHO05D002873 9.7e-08 61.2 60 56.7
Zm00001eb348080 Zea mays HOM05D002426 ORTHO05D002873 9.7e-08 61.2 55 60.0
MSTRG.9236 Avicennia marina HOM05D002426 ORTHO05D002873 1.3e-07 60.8 60 60.0
Cfa008492 Carpinus fangiana HOM05D002426 ORTHO05D002873 1.3e-07 60.8 60 58.3
CiPaw.07G084500 Carya illinoinensis HOM05D002426 ORTHO05D002873 1.3e-07 60.8 60 56.7
Phvul.002G247800 Phaseolus vulgaris HOM05D002426 ORTHO05D002873 1.3e-07 60.8 60 60.0
Thecc.04G159200 Theobroma cacao HOM05D002426 ORTHO05D002873 1.3e-07 60.8 60 58.3
Zm00001eb246700 Zea mays HOM05D002426 ORTHO05D002873 1.3e-07 60.8 55 61.8
CAN.G691.17 Capsicum annuum HOM05D002426 ORTHO05D002873 1.7e-07 60.5 60 55.0
Cc03_g15210 Coffea canephora HOM05D002426 ORTHO05D002873 1.7e-07 60.5 55 60.0
DCAR_031599 Daucus carota HOM05D002426 ORTHO05D002873 1.7e-07 60.5 60 58.3
Dinv17148 Davidia involucrata HOM05D002426 ORTHO05D002873 1.7e-07 60.5 60 58.3
Lalb_Chr12g0204551 Lupinus albus HOM05D002426 ORTHO05D002873 1.7e-07 60.5 60 56.7
PGR031G2926 Punica granatum HOM05D002426 ORTHO05D002873 1.7e-07 60.5 60 58.3
Solyc12g096810.2 Solanum lycopersicum HOM05D002426 ORTHO05D002873 1.7e-07 60.5 60 58.3
Gohir.A10G146800 Gossypium hirsutum HOM05D002426 ORTHO05D002873 2.2e-07 60.1 60 56.7
Hma1.2p1_0108F.1_g051950 Hydrangea macrophylla HOM05D002426 ORTHO05D002873 2.2e-07 60.1 60 58.3
Lalb_Chr03g0038021 Lupinus albus HOM05D002426 ORTHO05D002873 2.2e-07 60.1 60 58.3
Cc09_g04280 Coffea canephora HOM05D002426 ORTHO05D002873 2.8e-07 59.7 60 55.0
Nitab4.5_0001677g0030 Nicotiana tabacum HOM05D002426 ORTHO05D002873 2.8e-07 59.7 60 55.0
Os02g0608400 Oryza sativa ssp. japonica HOM05D002426 ORTHO05D002873 2.8e-07 59.7 55 60.0
Sed0005353 Sechium edule HOM05D002426 ORTHO05D002873 2.8e-07 59.7 60 56.7
CiPaw.01G199600 Carya illinoinensis HOM05D002426 ORTHO05D002873 3.7e-07 59.3 60 58.3
Ca_17844_v3 Cicer arietinum L. HOM05D002426 ORTHO05D002873 3.7e-07 59.3 60 55.0
COL.COLO4_37063 Corchorus olitorius HOM05D002426 ORTHO05D002873 3.7e-07 59.3 55 60.0
Duzib128G0622 Durio zibethinus HOM05D002426 ORTHO05D002873 3.7e-07 59.3 60 56.7
MBI07_g36522_MAGBIO Magnolia biondii HOM05D002426 ORTHO05D002873 3.7e-07 59.3 55 58.2
Thecc.05G113800 Theobroma cacao HOM05D002426 ORTHO05D002873 3.7e-07 59.3 60 55.0
COL.COLO4_22909 Corchorus olitorius HOM05D002426 ORTHO05D002873 4.8e-07 58.9 60 55.0
Lj1g0025516 Lotus japonicus HOM05D002426 ORTHO05D002873 4.8e-07 58.9 60 56.7
Os04g0496800 Oryza sativa ssp. japonica HOM05D002426 ORTHO05D002873 4.8e-07 58.9 55 60.0
QL10p059584 Quercus lobata HOM05D002426 ORTHO05D002873 4.8e-07 58.9 60 60.0
TWI18G0535 Tripterygium wilfordii HOM05D002426 ORTHO05D002873 4.8e-07 58.9 55 58.2
HPP92_009176 Vanilla planifolia HOM05D002426 ORTHO05D002873 4.8e-07 58.9 55 56.4
HPP92_009184 Vanilla planifolia HOM05D002426 ORTHO05D002873 4.8e-07 58.9 55 56.4
HPP92_009187 Vanilla planifolia HOM05D002426 ORTHO05D002873 4.8e-07 58.9 55 56.4
Ah.07g203060 Amaranthus hybridus HOM05D002426 ORTHO05D002873 6.3e-07 58.5 60 60.0
CSS0043769 Camellia sinensis var. sinensis HOM05D002426 ORTHO05D002873 6.3e-07 58.5 60 56.7
Haze_04622 Corylus avellana HOM05D002426 ORTHO05D002873 6.3e-07 58.5 60 56.7
Duzib177G0202 Durio zibethinus HOM05D002426 ORTHO05D002873 6.3e-07 58.5 60 55.0
Duzib268G1434 Durio zibethinus HOM05D002426 ORTHO05D002873 6.3e-07 58.5 55 56.4
Gohir.D13G095600 Gossypium hirsutum HOM05D002426 ORTHO05D002873 6.3e-07 58.5 60 56.7
Gorai.001G247800 Gossypium raimondii HOM05D002426 ORTHO05D002873 6.3e-07 58.5 60 56.7
EL10Ac4g10035 Beta vulgaris HOM05D002426 ORTHO05D002873 8.2e-07 58.2 55 56.4
Gohir.D10G119300 Gossypium hirsutum HOM05D002426 ORTHO05D002873 8.2e-07 58.2 60 55.0
Gorai.011G131100 Gossypium raimondii HOM05D002426 ORTHO05D002873 8.2e-07 58.2 60 55.0
Actinidia05853 Actinidia chinensis HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 56.7
CANSAT64G2142 Cannabis sativa HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 55.0
Lju470A12T58 Lonicera japonica HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 56.7
PGR042G3285 Punica granatum HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 55.0
Sabra07G0113800 Salix brachista HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 56.7
Sabra07G0117100 Salix brachista HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 56.7
SGA_v2.0_scaffold62G21483 Striga asiatica HOM05D002426 ORTHO05D002873 1.1e-06 57.8 55 58.2
VMungo0251G3491 Vigna mungo HOM05D002426 ORTHO05D002873 1.1e-06 57.8 60 58.3
Atru.chr3.1922 Acer truncatum HOM05D002426 ORTHO05D002873 1.4e-06 57.4 60 56.7
Gohir.A13G075800 Gossypium hirsutum HOM05D002426 ORTHO05D002873 1.4e-06 57.4 60 55.0
Potri.007G142000 Populus trichocarpa HOM05D002426 ORTHO05D002873 1.4e-06 57.4 60 56.7
PGSC0003DMG400016172 Solanum tuberosum HOM05D002426 ORTHO05D002873 1.4e-06 57.4 60 55.0
GSVIVG01038211001 Vitis vinifera HOM05D002426 ORTHO05D002873 1.4e-06 57.4 60 58.3
Eucgr.B01451 Eucalyptus grandis HOM05D002426 ORTHO05D002873 1.8e-06 57.0 60 55.0
Nitab4.5_0000743g0250 Nicotiana tabacum HOM05D002426 ORTHO05D002873 1.8e-06 57.0 60 53.3
TPR.G6723 Trifolium pratense HOM05D002426 ORTHO05D002873 1.8e-06 57.0 71 52.1
TAR158G0001 Trochodendron aralioides HOM05D002426 ORTHO05D002873 1.8e-06 57.0 60 58.3
arahy.Tifrunner.gnm1.ann1.P4B8S7 Arachis hypogaea HOM05D002426 ORTHO05D002873 2.4e-06 56.6 66 47.0
CDE09G0268 Ceratophyllum demersum HOM05D002426 ORTHO05D002873 2.4e-06 56.6 61 55.7
Glyma.08G125700 Glycine max HOM05D002426 ORTHO05D002873 2.4e-06 56.6 61 59.0
Hma1.2p1_1218F.1_g267730 Hydrangea macrophylla HOM05D002426 ORTHO05D002873 2.4e-06 56.6 60 51.7
QL01p052207 Quercus lobata HOM05D002426 ORTHO05D002873 2.4e-06 56.6 55 54.5
Atru.chr10.156 Acer truncatum HOM05D002426 ORTHO05D002873 3.1e-06 56.2 57 50.9
Thhalv10005802m.g Eutrema salsugineum HOM05D002426 ORTHO05D002873 3.1e-06 56.2 55 56.4
Manes.01G018300 Manihot esculenta HOM05D002426 ORTHO05D002873 3.1e-06 56.2 60 55.0
Rhsim05G0163000 Rhododendron simsii HOM05D002426 ORTHO05D002873 3.1e-06 56.2 57 56.1
arahy.Tifrunner.gnm1.ann1.5D8RXX Arachis hypogaea HOM05D002426 ORTHO05D002873 4.1e-06 55.8 60 53.3
Lj4g0005716 Lotus japonicus HOM05D002426 ORTHO05D002873 4.1e-06 55.8 60 55.0
Nn7g37487 Nelumbo nucifera HOM05D002426 ORTHO05D002873 4.1e-06 55.8 60 55.0
Phvul.008G051400 Phaseolus vulgaris HOM05D002426 ORTHO05D002873 4.1e-06 55.8 60 51.7
EL10Ac3g06135 Beta vulgaris HOM05D002426 ORTHO05D002873 5.3e-06 55.5 60 56.7
BcaB02g08207 Brassica carinata HOM05D002426 ORTHO05D002873 5.3e-06 55.5 60 55.0
Eucgr.H01863 Eucalyptus grandis HOM05D002426 ORTHO05D002873 5.3e-06 55.5 60 51.7
Glyma.05G167300 Glycine max HOM05D002426 ORTHO05D002873 5.3e-06 55.5 61 57.4
Glyma.18G245200 Glycine max HOM05D002426 ORTHO05D002873 5.3e-06 55.5 60 50.0
Nn1g09498 Nelumbo nucifera HOM05D002426 ORTHO05D002873 5.3e-06 55.5 60 53.3
Rhsim09G0005100 Rhododendron simsii HOM05D002426 ORTHO05D002873 5.3e-06 55.5 60 56.7
Hund07387 Selenicereus undatus HOM05D002426 ORTHO05D002873 5.3e-06 55.5 55 52.7
THA.LOC104804209 Tarenaya hassleriana HOM05D002426 ORTHO05D002873 5.3e-06 55.5 63 50.8
Ah.04g159370 Amaranthus hybridus HOM05D002426 ORTHO05D002873 7.0e-06 55.1 60 50.0
C04p32890 Brassica napus HOM05D002426 ORTHO05D002873 7.0e-06 55.1 60 55.0
MD02G1003200 Malus domestica HOM05D002426 ORTHO05D002873 7.0e-06 55.1 62 56.5
Prupe.7G268000 Prunus persica HOM05D002426 ORTHO05D002873 7.0e-06 55.1 62 58.1
Sc16g0010710 Simmondsia chinensis HOM05D002426 ORTHO05D002873 7.0e-06 55.1 60 50.0
Zm00001eb078520 Zea mays HOM05D002426 ORTHO05D002873 7.0e-06 55.1 55 58.2
Aa31LG10G14070 Aethionema arabicum HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 55.0
BcaC02g10089 Brassica carinata HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 55.0
BolC4t24852H Brassica oleracea HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 55.0
AUR62023744 Chenopodium quinoa HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 55.0
Peaxi162Scf00254g00311 Petunia axillaris HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 51.7
Psat3g102240 Pisum sativum HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 53.3
Sp5g03320 Schrenkiella parvula HOM05D002426 ORTHO05D002873 9.1e-06 54.7 60 55.0


User provided reference genes

Program Settings