Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 5.0e-196 687.6 341 100.0
SGA_v2.0_scaffold24G10321 Striga asiatica HOM05D011758 ORTHO05D006294 1.2e-56 224.6 118 85.6
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 6.1e-53 212.2 318 40.3
SGA_v2.0_scaffold24G10326 Striga asiatica HOM05D011758 ORTHO05D006294 6.8e-52 208.8 138 71.0
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 2.6e-51 206.8 324 39.5
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 3.1e-49 199.9 322 38.8
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 4.1e-49 199.5 138 66.7
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 5.4e-49 199.1 321 40.8
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 9.1e-49 198.4 316 37.3
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 6.1e-45 185.7 334 32.0
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 6.1e-37 159.1 328 33.8
SGA_v2.0_scaffold24G10382 Striga asiatica HOM05D011758 ORTHO05D006294 6.1e-37 159.1 109 69.7
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 2.1e-29 134.0 310 29.7
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.0e-27 127.5 318 30.2
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.0e-27 127.5 303 30.7
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 3.7e-26 123.2 319 28.5
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 4.9e-26 122.9 319 30.4
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.4e-26 122.5 317 31.9
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 1.1e-25 121.7 319 28.2
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 7.0e-25 119.0 320 27.5
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 5.0e-23 112.8 322 27.6
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.5e-22 111.3 312 27.6
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 7.3e-22 109.0 294 27.2
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.2e-21 108.2 308 27.9
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 2.1e-21 107.5 319 28.8
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.6e-21 106.7 338 26.3
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 5.2e-20 102.8 298 28.5
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.6e-19 100.5 318 26.7
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.4e-19 100.1 308 27.3
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.8e-19 99.4 309 26.2
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 3.7e-18 96.7 327 25.1
SGA_v2.0_scaffold69G23067 Striga asiatica HOM05D007354 ORTHO05D006294 2.4e-17 94.0 327 26.9
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 9.2e-17 92.0 318 27.0
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 6.0e-16 89.4 229 27.5
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 1.0e-15 88.6 315 23.8
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 1.0e-15 88.6 332 25.6
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.3e-15 88.2 106 39.6
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.3e-15 87.4 303 26.4
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 3.0e-15 87.0 332 25.9
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 5.1e-15 86.3 311 25.7
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 1.9e-14 84.3 97 38.1
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.5e-14 84.0 266 28.6
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 7.3e-14 82.4 339 24.8
SGA_v2.0_scaffold48G17988 Striga asiatica HOM05D011758 ORTHO05D006294 7.3e-14 82.4 100 44.0
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 3.6e-13 80.1 115 33.0
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 8.1e-13 79.0 286 25.5
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 1.4e-12 78.2 291 27.8
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 2.3e-12 77.4 115 33.0
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 5.2e-12 76.3 273 25.6
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.8e-12 75.9 96 34.4
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.9e-12 75.5 101 33.7
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.5e-11 74.7 101 34.7
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-11 74.7 94 39.4
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.5e-11 74.7 129 34.1
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 2.0e-11 74.3 111 33.3
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.4e-11 73.6 89 38.2
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 1.3e-10 71.6 241 26.1
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.7e-10 71.2 215 27.9
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 1.7e-10 71.2 252 27.0
EL10As4g23465 Beta vulgaris HOM05D003035 ORTHO05D000440 2.2e-10 70.9 307 24.8
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 2.2e-10 70.9 100 33.0
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 2.9e-10 70.5 115 31.3
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 4.9e-10 69.7 309 22.7
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 6.4e-10 69.3 102 32.4
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 8.4e-10 68.9 104 31.7
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-09 68.6 297 24.6
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 1.4e-09 68.2 95 34.7
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 1.9e-09 67.8 98 34.7
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.9e-09 67.8 100 31.0
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 3.2e-09 67.0 104 33.7
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 3.2e-09 67.0 105 33.3
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.1e-09 66.6 112 34.8
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.1e-09 66.6 104 31.7
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 7.1e-09 65.9 103 33.0
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 9.2e-09 65.5 99 31.3
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 1.6e-08 64.7 251 21.9
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.1e-08 64.3 312 26.3
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 3.5e-08 63.5 198 26.3
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 6.0e-08 62.8 95 32.6
Haze_17578 Corylus avellana HOM05D000151 ORTHO05D000074 7.8e-08 62.4 84 46.4
Nn1g04030 Nelumbo nucifera HOM05D000151 ORTHO05D000074 7.8e-08 62.4 273 26.0
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.3e-07 60.8 104 29.8
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.3e-07 60.8 112 33.0
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 3.9e-07 60.1 100 34.0
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.6e-07 59.3 104 30.8
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.6e-07 58.9 109 34.9
FAN22G0205 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.6e-07 58.9 294 23.5
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-06 58.5 89 36.0
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.5e-06 57.4 75 42.7
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 5.6e-06 56.2 84 34.5
PGSC0003DMG400046725 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.3e-06 55.8 90 33.3
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 9.6e-06 55.5 82 30.5


User provided reference genes

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