Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 6.6e-164 580.9 344 100.0
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 3.5e-48 196.4 204 65.2
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 4.6e-48 196.1 204 65.2
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 1.3e-47 194.5 204 62.7
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 2.3e-47 193.7 205 50.2
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 1.1e-46 191.4 205 62.4
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 9.5e-46 188.3 204 63.7
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 3.6e-45 186.4 204 67.6
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 4.7e-45 186.0 206 63.6
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 4.7e-45 186.0 204 65.7
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.4e-44 184.5 204 64.2
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 1.8e-44 184.1 204 62.7
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 2.3e-44 183.7 204 63.7
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 5.2e-44 182.6 204 61.8
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 5.2e-44 182.6 204 61.8
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 5.2e-44 182.6 204 63.2
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 1.5e-43 181.0 204 63.7
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 1.5e-43 181.0 204 63.2
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 1.5e-43 181.0 204 63.7
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 2.6e-43 180.3 204 62.7
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 3.4e-43 179.9 204 63.2
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 3.4e-43 179.9 204 61.3
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 5.8e-43 179.1 206 63.1
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 5.8e-43 179.1 204 47.1
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 5.8e-43 179.1 204 63.2
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.8e-43 179.1 204 63.2
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 5.8e-43 179.1 204 63.2
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 7.6e-43 178.7 207 49.3
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 7.6e-43 178.7 204 62.7
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 7.6e-43 178.7 204 61.8
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 7.6e-43 178.7 204 63.2
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 7.6e-43 178.7 204 63.2
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 7.6e-43 178.7 204 62.3
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 9.9e-43 178.3 204 63.7
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 1.7e-42 177.6 204 60.8
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 1.7e-42 177.6 204 62.7
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 2.2e-42 177.2 204 62.3
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 2.9e-42 176.8 207 48.8
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 2.9e-42 176.8 207 48.8
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 2.9e-42 176.8 206 62.6
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 2.9e-42 176.8 204 62.7
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 3.7e-42 176.4 204 64.7
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 3.7e-42 176.4 204 61.3
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 4.9e-42 176.0 204 61.3
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 1.1e-41 174.9 204 61.8
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 1.1e-41 174.9 206 61.2
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 1.1e-41 174.9 220 47.7
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 2.4e-41 173.7 204 61.8
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 3.2e-41 173.3 204 61.8
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 3.2e-41 173.3 211 61.1
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 3.2e-41 173.3 204 60.3
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 3.2e-41 173.3 207 57.5
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 9.2e-41 171.8 212 59.0
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 1.2e-40 171.4 204 61.8
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 2.7e-40 170.2 204 61.3
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 2.7e-40 170.2 204 59.8
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 3.5e-40 169.9 204 59.8
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.0e-39 168.3 204 60.3
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 1.0e-39 168.3 204 60.3
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 1.7e-39 167.5 204 61.3
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 1.7e-39 167.5 210 45.7
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.7e-39 167.5 227 41.4
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 1.7e-39 167.5 204 58.8
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 6.6e-39 165.6 206 60.2
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 6.6e-39 165.6 206 59.7
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 6.6e-39 165.6 204 60.8
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 8.6e-39 165.2 204 58.3
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 1.1e-38 164.9 204 58.8
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.1e-38 164.9 204 59.8
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 1.1e-38 164.9 204 59.8
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.5e-38 164.5 277 38.6
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 1.5e-38 164.5 204 58.8
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 1.9e-38 164.1 206 59.7
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 3.3e-38 163.3 206 60.2
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 3.3e-38 163.3 206 46.1
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 3.3e-38 163.3 204 59.3
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 3.3e-38 163.3 204 58.3
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 4.3e-38 162.9 204 58.3
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 5.6e-38 162.5 206 59.7
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 7.3e-38 162.2 206 60.2
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 7.3e-38 162.2 204 59.8
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 1.6e-37 161.0 205 44.4
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 2.1e-37 160.6 204 58.8
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 2.1e-37 160.6 204 59.3
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 2.8e-37 160.2 204 58.3
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 1.1e-36 158.3 211 42.2
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.4e-36 157.9 204 57.4
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 8.9e-36 155.2 204 60.3
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.2e-35 154.8 204 57.4
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 1.2e-35 154.8 183 45.4
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 9.9e-35 151.8 204 56.9
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 9.9e-35 151.8 204 44.1
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 2.2e-34 150.6 205 44.9
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 2.2e-34 150.6 186 61.3
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 3.8e-34 149.8 204 40.7
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 1.1e-33 148.3 136 71.3
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 9.3e-33 145.2 204 40.7
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 1.7e-31 141.0 198 58.6
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.3e-31 140.6 136 77.2
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 3.0e-31 140.2 177 61.6
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 5.1e-31 139.4 138 69.6
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 8.7e-31 138.7 123 57.7
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.5e-30 137.9 114 64.0
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 3.3e-30 136.7 209 52.2
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 9.6e-30 135.2 121 76.0
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 1.6e-29 134.4 222 52.7
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 6.2e-29 132.5 139 69.1
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.8e-28 131.0 120 55.0
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.8e-28 131.0 200 39.0
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 6.9e-28 129.0 120 54.2
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 6.9e-28 129.0 119 54.6
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 9.9e-27 125.2 211 38.4
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 2.9e-26 123.6 120 52.5
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 3.0e-23 113.6 116 50.0
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 2.5e-22 110.5 125 48.0
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 2.1e-21 107.5 148 41.2
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 2.4e-20 104.0 121 44.6
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.7e-18 97.8 197 36.0
SGA_v2.0_scaffold7G03687 Striga asiatica HOM05D002901 ORTHO05D003183 9.3e-17 92.0 45 100.0
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 6.7e-15 85.9 112 39.3
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 8.4e-10 68.9 38 81.6
Nitab4.5_0011078g0020 Nicotiana tabacum HOM05D006436 ORTHO05D008011 4.2e-09 66.6 38 78.9
Nitab4.5_0011078g0030 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.7e-08 63.9 46 60.9
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 6.0e-08 62.8 96 36.5
CAN.G935.5 Capsicum annuum HOM05D006436 ORTHO05D008011 3.9e-07 60.1 36 75.0
RcHm_v2.0_Chr4g0394581 Rosa chinensis HOM05D004344 ORTHO05D006026 9.6e-06 55.5 29 82.8


User provided reference genes

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