Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1848.9 930 100.0
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1423.7 935 76.5
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1292.7 910 74.6
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 910 73.7
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1263.4 944 71.4
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1249.2 905 72.6
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1245.3 911 70.8
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1239.9 890 72.7
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1221.1 912 70.9
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1211.8 888 71.3
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1204.5 899 71.0
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1204.5 889 71.4
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1203.7 886 71.0
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1203.3 842 73.8
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1202.6 889 70.9
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1202.2 907 70.1
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1201.0 907 70.0
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1201.0 910 70.2
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1199.9 878 71.0
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1198.3 889 70.8
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1198.0 900 70.6
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1197.6 912 69.2
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1195.3 907 69.7
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1194.5 892 70.4
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1194.1 887 70.5
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1193.7 905 69.0
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1193.3 892 70.3
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1192.9 884 70.5
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1192.9 896 70.1
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1190.3 870 71.5
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1189.1 915 69.0
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1188.7 910 69.2
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1185.6 908 69.1
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1185.2 890 70.2
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1184.9 888 70.6
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1184.1 890 70.2
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1184.1 892 70.2
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1183.3 889 70.2
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1182.9 892 70.2
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1182.9 906 69.2
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1181.8 906 69.2
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1181.4 906 68.8
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1181.4 888 70.2
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1181.4 905 68.6
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1180.6 909 68.2
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1179.5 871 70.7
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1178.3 907 69.6
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1177.2 900 69.2
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1177.2 888 70.0
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 881 69.6
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 885 69.9
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1176.0 905 69.1
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1175.2 881 69.7
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1173.7 869 70.4
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1173.7 887 70.1
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1172.9 910 69.0
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1172.1 873 70.0
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1171.4 890 70.0
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1171.4 906 69.2
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1171.4 896 68.8
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1171.0 931 67.5
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1170.6 898 69.3
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1169.1 882 70.3
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1168.7 900 68.4
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1167.9 907 68.6
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1166.8 909 68.1
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1166.8 881 69.2
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1162.1 883 69.6
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1161.4 888 69.0
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1161.0 924 67.9
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1159.4 889 68.8
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1159.1 910 67.8
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1158.7 906 68.8
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1158.7 907 68.7
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1157.1 883 69.2
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1156.7 898 68.3
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1156.4 903 68.5
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1155.2 898 69.3
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1154.0 906 68.1
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1152.9 878 69.4
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1152.5 886 69.1
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1151.3 895 68.8
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1150.6 889 68.1
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1149.4 898 68.0
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1149.4 957 62.1
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1149.4 943 66.0
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1148.7 879 69.5
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1146.0 848 70.8
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1143.6 892 68.6
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1143.3 889 67.8
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1142.9 882 68.3
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1141.7 889 68.6
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1140.9 894 69.0
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1137.5 902 67.3
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1135.9 907 67.1
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1128.6 894 66.8
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1128.2 903 67.6
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1127.9 905 67.4
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1127.5 889 67.8
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1124.4 888 67.2
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1122.1 892 67.9
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1122.1 892 67.9
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1122.1 892 67.9
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1121.7 876 68.0
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1117.8 951 65.2
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1116.3 904 66.4
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1116.3 881 67.7
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1114.4 898 66.6
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1113.2 882 66.9
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1112.8 911 66.3
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1109.4 906 66.4
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1109.0 888 67.2
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1104.7 889 67.6
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1104.0 883 67.8
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1103.6 884 66.2
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1102.8 887 67.8
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1102.8 854 68.3
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 888 66.3
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 888 66.3
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 888 66.3
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1099.0 888 66.3
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1097.8 889 67.0
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1096.6 889 67.0
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1085.1 881 63.9
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1084.7 851 67.7
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1084.3 887 68.0
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1078.9 877 65.2
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1077.8 939 64.1
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1075.5 885 65.6
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 6.4e-312 1074.7 892 65.1
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 6.4e-312 1074.3 922 62.5
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 8.2e-310 1067.0 846 67.8
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 1.6e-305 1052.7 861 63.9
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 6.1e-305 1050.8 825 67.6
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 6.7e-304 1047.3 759 71.5
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 2.9e-299 1031.9 873 63.6
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 8.5e-299 1030.4 888 63.9
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 7.5e-295 1017.3 877 62.5
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 1.7e-294 1016.1 880 63.9
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 6.3e-294 1014.2 877 62.3
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 3.0e-288 995.3 802 67.7
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 2.4e-285 985.7 832 62.9
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 8.3e-254 880.9 695 62.9
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 8.1e-249 864.4 677 64.8
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.2e-236 823.9 905 54.0
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 4.0e-224 782.3 646 63.2
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 5.5e-221 771.9 578 68.2
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 8.2e-217 758.1 603 68.8
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 8.3e-161 572.0 772 46.1
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 4.0e-131 473.4 520 51.7
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 5.8e-130 469.5 352 74.4
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 2.2e-129 467.6 329 70.5
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 3.6e-116 423.7 322 71.7
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 5.1e-94 350.1 261 68.2
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.4e-90 337.4 460 45.2
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 4.4e-77 293.9 649 39.8
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 3.7e-44 184.5 135 67.4
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 2.0e-42 178.7 219 48.4
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 8.0e-39 166.8 133 62.4
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 2.8e-31 141.7 76 86.8
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 8.9e-30 136.7 566 26.5
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 3.5e-26 124.8 68 86.8
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 2.3e-25 122.1 96 66.7
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 3.9e-25 121.3 503 25.0
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 8.6e-25 120.2 323 30.0
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 2.5e-24 118.6 336 29.8
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 5.2e-22 110.9 150 46.7
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 1.1e-16 93.2 60 68.3
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 6.2e-15 87.4 124 39.5
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 8.1e-15 87.0 495 23.4
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 8.9e-14 83.6 86 51.2
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 4.6e-10 71.2 266 28.9
CBR_g38920 Chara braunii HOM05D003945 ORTHO05D004625 3.9e-09 68.2 121 34.7
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 5.1e-09 67.8 331 22.4
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-07 63.2 111 37.8
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 4.8e-07 61.2 38 76.3


User provided reference genes

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