Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 0.0e+00 1536.2 722 100.0
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-208 729.2 754 56.4
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 1.3e-166 590.9 714 48.9
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 6.0e-66 256.5 387 43.2
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 1.7e-60 238.4 405 41.2
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 5.6e-56 223.4 399 40.1
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 1.6e-47 195.3 376 38.8
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 5.8e-45 186.8 392 34.2
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 5.3e-38 163.7 360 36.1
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 4.5e-37 160.6 335 34.6
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 5.8e-37 160.2 361 35.2
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 7.6e-37 159.8 351 35.0
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 4.2e-35 154.1 361 34.3
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 1.0e-33 149.4 310 35.8
SGA_v2.0_scaffold181G39796 Striga asiatica HOM05D017978 ORTHO05D010595 4.8e-31 140.6 319 32.0
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 1.8e-30 138.7 350 31.7
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 1.2e-29 136.0 319 33.5
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 3.0e-25 121.3 334 30.2
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-24 119.4 408 28.9
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 7.4e-24 116.7 299 32.8
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 2.2e-23 115.2 382 29.1
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 1.8e-22 112.1 320 31.6
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-19 102.8 273 33.7
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 1.9e-19 102.1 318 30.8
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 4.2e-19 100.9 292 31.5
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 1.6e-18 99.0 356 29.2
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 2.1e-18 98.6 240 32.1
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 2.7e-18 98.2 199 40.2
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 3.6e-18 97.8 265 30.6
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 2.3e-17 95.1 259 29.3
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 3.0e-17 94.7 346 27.7
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.0e-16 92.0 369 30.1
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.4e-16 90.1 280 31.4
SGA_v2.0_scaffold84G26560 Striga asiatica HOM05D012911 ORTHO05D010595 7.4e-16 90.1 265 30.6
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 2.2e-15 88.6 268 31.3
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 8.2e-15 86.7 255 29.8
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.8e-14 85.5 261 31.0
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.8e-14 85.5 524 22.9
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 3.1e-14 84.7 266 30.8
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.3e-14 84.0 328 28.4
SGA_v2.0_scaffold130G34210 Striga asiatica HOM05D030202 ORTHO05D404626 5.3e-14 84.0 186 30.1
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 5.3e-14 84.0 658 22.9
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 3.4e-13 81.3 269 27.9
SGA_v2.0_scaffold130G34211 Striga asiatica HOM05D030202 ORTHO05D403157 1.0e-12 79.7 198 27.8
SGA_v2.0_scaffold24G10256 Striga asiatica HOM05D011185 ORTHO05D406369 2.2e-12 78.6 235 32.3
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 3.8e-12 77.8 238 26.9
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 3.8e-12 77.8 255 29.4
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.8e-12 77.8 247 29.6
Thecc.10G169000 Theobroma cacao HOM05D000007 ORTHO05D000039 1.1e-11 76.3 177 32.8
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-11 75.9 255 26.7
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.5e-11 75.1 277 26.0
Thecc.10G169400 Theobroma cacao HOM05D000007 ORTHO05D000039 2.5e-11 75.1 177 32.2
PGSC0003DMG400045879 Solanum tuberosum HOM05D013992 ORTHO05D011565 5.5e-11 73.9 155 34.8
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 9.4e-11 73.2 259 30.5
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.1e-10 72.0 285 25.6
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 4.7e-10 70.9 277 26.7
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.0e-09 69.7 173 32.9
Gohir.D10G241000 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.4e-09 69.3 342 24.0
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 1.4e-09 69.3 256 25.4
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-09 68.2 276 27.9
SGA_v2.0_scaffold46G17352 Striga asiatica HOM05D037070 ORTHO05D405361 3.0e-09 68.2 121 40.5
SGA_v2.0_scaffold89G27576 Striga asiatica HOM05D037070 ORTHO05D007669 3.0e-09 68.2 121 40.5
PGSC0003DMG400006277 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.9e-09 67.8 243 26.3
SGA_v2.0_scaffold104G30184 Striga asiatica HOM05D037070 ORTHO05D404193 6.7e-09 67.0 121 39.7
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.8e-09 66.6 344 24.1
Gorai.011G281200 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.1e-08 66.2 352 23.9
Gohir.D10G241008 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.5e-08 65.9 278 25.2
Gorai.011G276700 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.5e-08 65.9 277 24.9
Gohir.D10G241600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.0e-08 65.5 347 23.6
Medtr3g034160 Medicago truncatula HOM05D000007 ORTHO05D000017 3.3e-08 64.7 323 21.7
SGA_v2.0_scaffold7G03938 Striga asiatica HOM05D012911 ORTHO05D010595 3.3e-08 64.7 201 26.9
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 4.4e-08 64.3 264 24.6
Lj3C654T8 Lonicera japonica HOM05D000007 ORTHO05D000017 4.4e-08 64.3 146 30.8
PGR142G3580 Punica granatum HOM05D000007 ORTHO05D000017 4.4e-08 64.3 135 34.8
PSO017G0991 Papaver somniferum HOM05D000007 ORTHO05D000017 7.4e-08 63.5 204 26.0
Peaxi162Scf00048g00184 Petunia axillaris HOM05D000007 ORTHO05D000017 7.4e-08 63.5 169 27.2
FvH4_2g08290 Fragaria vesca HOM05D000007 ORTHO05D000017 9.7e-08 63.2 162 31.5
FAN24G0304 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.7e-08 63.2 162 31.5
THA.LOC104799786 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 9.7e-08 63.2 232 24.1
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-07 62.8 285 26.0
Nitab4.5_0005464g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-07 62.8 143 28.7
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 1.3e-07 62.8 155 31.6
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.7e-07 62.4 346 24.3
Aqoxy5G04154 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 2.2e-07 62.0 164 29.9
Gorai.011G276500 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.2e-07 62.0 270 24.4
MD17G1124300 Malus domestica HOM05D000007 ORTHO05D000017 2.2e-07 62.0 159 28.3
Nitab4.5_0000059g0530 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-07 61.6 142 28.9
Peaxi162Scf00698g00119 Petunia axillaris HOM05D000007 ORTHO05D000017 2.8e-07 61.6 164 27.4
SalBow5G1379 Salvia bowleyana HOM05D000068 ORTHO05D037496 2.8e-07 61.6 275 26.9
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 4.8e-07 60.8 532 22.2
PSO675G8203 Papaver somniferum HOM05D000007 ORTHO05D000017 4.8e-07 60.8 126 29.4
SalBow6G1338 Salvia bowleyana HOM05D012950 ORTHO05D000039 4.8e-07 60.8 255 25.9
SGA_v2.0_scaffold39G15154 Striga asiatica HOM05D012724 ORTHO05D010595 4.8e-07 60.8 259 27.4
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.8e-07 60.8 132 31.8
Cfa000498 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.2e-07 60.1 315 23.5
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 8.2e-07 60.1 138 33.3
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.1e-06 59.7 284 24.3
COL.COLO4_26718 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.4e-06 59.3 241 24.9
Lj1C663T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-06 59.3 282 24.8
Oeu028341.1 Olea europaea HOM05D000007 ORTHO05D000039 1.4e-06 59.3 156 30.1
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 1.8e-06 58.9 204 25.5
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 1.8e-06 58.9 177 29.4
Nitab4.5_0000191g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.8e-06 58.9 147 31.3
Peaxi162Scf00391g00076 Petunia axillaris HOM05D000007 ORTHO05D000017 1.8e-06 58.9 128 29.7
PGR083G0217 Punica granatum HOM05D000007 ORTHO05D000017 1.8e-06 58.9 158 25.3
Eucgr.H02735 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.4e-06 58.5 137 29.2
Peaxi162Scf00052g00052 Petunia axillaris HOM05D000007 ORTHO05D000017 2.4e-06 58.5 178 26.4
SalBow1G3984 Salvia bowleyana HOM05D037136 ORTHO05D005165 2.4e-06 58.5 247 24.3
Thecc.04G270100 Theobroma cacao HOM05D000007 ORTHO05D000017 2.4e-06 58.5 248 25.0
FAN18G3215 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.1e-06 58.2 269 26.8
Peaxi162Scf00698g00012 Petunia axillaris HOM05D000007 ORTHO05D000017 3.1e-06 58.2 149 28.9
Sc17g0007800 Simmondsia chinensis HOM05D000007 ORTHO05D000017 3.1e-06 58.2 156 29.5
Peaxi162Scf00048g01819 Petunia axillaris HOM05D000007 ORTHO05D000017 4.1e-06 57.8 145 28.3
QL11p045818 Quercus lobata HOM05D000007 ORTHO05D000039 4.1e-06 57.8 299 24.4
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 5.3e-06 57.4 151 27.8
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.3e-06 57.4 182 28.6
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 5.3e-06 57.4 164 28.0
PGSC0003DMG400046279 Solanum tuberosum HOM05D013992 ORTHO05D011565 5.3e-06 57.4 143 30.1
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.3e-06 57.4 282 27.7
AUR62012552 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.0e-06 57.0 326 22.1
Lalb_Chr05g0222901 Lupinus albus HOM05D000007 ORTHO05D000017 7.0e-06 57.0 165 25.5
Peaxi162Scf00158g10012 Petunia axillaris HOM05D000007 ORTHO05D000017 7.0e-06 57.0 171 25.1
Cfa007564 Carpinus fangiana HOM05D000007 ORTHO05D000039 9.1e-06 56.6 144 31.9
Lj1C724G4 Lonicera japonica HOM05D000007 ORTHO05D000039 9.1e-06 56.6 306 21.2
Potri.017G012200 Populus trichocarpa HOM05D000007 ORTHO05D000039 9.1e-06 56.6 276 24.6
QL09p021305 Quercus lobata HOM05D000007 ORTHO05D000039 9.1e-06 56.6 183 26.2
PGSC0003DMG400022858 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.1e-06 56.6 184 25.0


User provided reference genes

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