Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 0.0e+00 1602.4 773 100.0
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 0.0e+00 1176.0 647 86.4
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 0.0e+00 1166.8 647 85.9
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 0.0e+00 1142.5 665 82.7
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 0.0e+00 1102.0 647 79.4
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 0.0e+00 1088.2 647 78.5
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 0.0e+00 1085.5 647 78.5
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 0.0e+00 1080.5 642 78.3
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 0.0e+00 1078.9 641 79.4
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 0.0e+00 1077.4 634 79.2
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 0.0e+00 1077.0 646 77.7
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 5.3e-312 1073.5 665 77.0
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 3.7e-311 1071.2 647 76.2
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 4.8e-311 1070.8 659 77.4
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 1.1e-310 1069.7 637 76.9
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 5.2e-310 1067.4 646 76.5
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 7.5e-309 1063.5 647 76.0
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 8.3e-308 1060.1 717 71.1
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 2.4e-307 1058.5 647 75.1
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 9.2e-307 1056.6 646 76.8
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 3.5e-306 1054.7 647 74.8
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 2.3e-305 1052.0 647 74.3
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 5.1e-305 1050.8 646 74.3
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 1.9e-304 1048.9 646 74.1
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 2.5e-304 1048.5 647 75.0
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 2.5e-304 1048.5 669 73.5
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 4.3e-304 1047.7 644 75.6
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 7.3e-304 1047.0 647 74.5
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 1.2e-303 1046.2 649 75.5
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 2.1e-303 1045.4 647 74.7
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 1.1e-302 1043.1 648 74.8
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 1.1e-302 1043.1 647 74.5
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.0e-302 1041.2 644 74.5
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 6.8e-302 1040.4 648 75.9
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 6.8e-302 1040.4 648 73.9
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 8.9e-302 1040.0 647 73.7
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 5.8e-301 1037.3 647 74.0
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.3e-300 1036.2 647 73.7
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 1.3e-300 1036.2 634 76.2
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 4.9e-300 1034.2 680 72.2
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 1.4e-299 1032.7 647 74.2
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 1.9e-299 1032.3 644 73.3
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 2.4e-299 1031.9 648 73.1
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 5.4e-299 1030.8 647 73.6
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 7.1e-299 1030.4 617 77.8
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 9.2e-299 1030.0 634 74.3
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 9.2e-299 1030.0 634 75.6
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 9.2e-299 1030.0 645 73.2
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 4.6e-298 1027.7 642 74.5
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 1.3e-297 1026.2 647 73.6
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 3.0e-297 1025.0 634 75.6
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 3.9e-297 1024.6 647 73.3
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 6.6e-297 1023.8 615 78.0
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 8.6e-297 1023.5 601 79.7
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 8.6e-297 1023.5 651 73.7
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.2e-295 1019.6 648 72.4
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 2.1e-295 1018.8 651 73.3
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 1.1e-294 1016.5 647 73.6
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 3.1e-294 1015.0 647 73.0
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 5.2e-294 1014.2 647 72.6
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.3e-292 1009.6 649 71.5
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 8.4e-292 1006.9 648 72.7
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 4.2e-291 1004.6 791 63.0
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 2.3e-289 998.8 643 70.9
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 2.3e-289 998.8 667 70.0
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 3.0e-289 998.4 647 71.4
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.4e-286 989.6 647 70.5
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 2.6e-285 985.3 644 71.4
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 4.5e-285 984.6 647 69.2
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 9.9e-285 983.4 646 70.9
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 1.7e-284 982.6 648 69.9
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 2.2e-284 982.2 635 71.8
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 2.2e-284 982.2 646 70.9
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 2.4e-283 978.8 590 75.8
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 5.4e-283 977.6 646 70.4
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 2.7e-282 975.3 646 71.1
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 2.7e-282 975.3 652 70.2
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 2.3e-281 972.2 646 70.6
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 2.3e-281 972.2 646 70.6
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 2.3e-281 972.2 646 70.6
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 6.7e-281 970.7 635 71.5
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 1.6e-274 949.5 634 68.9
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 3.5e-274 948.3 634 68.0
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 2.5e-272 942.2 584 75.0
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 4.3e-272 941.4 654 69.4
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 9.6e-272 940.3 634 67.5
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 9.7e-264 913.7 634 67.2
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 1.5e-261 906.4 648 66.7
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.3e-255 886.7 647 66.6
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 2.6e-253 879.0 556 72.7
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 7.7e-253 877.5 590 67.5
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 4.1e-246 855.1 563 70.0
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 1.3e-244 850.1 635 60.9
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 3.3e-240 835.5 573 67.5
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.8e-233 813.1 635 59.8
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 1.0e-228 797.3 636 58.6
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.6e-192 676.4 515 63.5
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 2.6e-184 649.8 357 80.1
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 4.7e-178 629.0 560 58.9
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 6.2e-170 602.1 381 78.5
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 1.5e-163 580.9 378 74.3
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.3e-148 531.2 377 66.6
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 6.5e-135 485.7 535 48.6
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 2.0e-115 421.0 234 77.8
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 1.8e-76 291.6 734 30.2
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 1.9e-73 281.6 145 84.1
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 1.2e-59 235.7 248 52.4
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 3.9e-47 194.1 204 51.5
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.3e-26 125.9 72 79.2
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.7e-26 125.6 90 66.7
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 7.2e-25 120.2 70 70.0
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 1.5e-22 112.5 77 59.7
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 4.8e-21 107.5 71 60.6
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 6.3e-21 107.1 70 64.3
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 4.1e-20 104.4 94 57.4
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 2.2e-18 98.6 69 63.8
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 8.5e-18 96.7 66 69.7
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 8.5e-18 96.7 66 69.7
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 8.5e-18 96.7 66 69.7
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 1.2e-16 92.8 93 52.7
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 1.8e-15 89.0 103 46.6
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.1e-14 86.3 51 68.6
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 5.9e-11 73.9 99 43.4
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 1.5e-06 59.3 78 46.2
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 3.3e-06 58.2 106 37.7


User provided reference genes

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