Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.9e-80 302.4 148 100.0
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 5.1e-73 277.7 150 94.0
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 4.9e-39 164.9 148 58.1
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 1.4e-38 163.3 149 61.1
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 1.2e-37 160.2 152 57.2
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.2e-37 160.2 140 61.4
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.0e-37 159.5 128 62.5
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 2.7e-37 159.1 167 53.3
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.3e-36 156.8 147 59.9
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.9e-36 155.6 118 64.4
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.9e-36 155.6 122 62.3
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.1e-35 153.7 128 57.8
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 3.3e-35 152.1 150 56.7
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.2e-34 150.2 144 55.6
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 1.6e-34 149.8 142 54.9
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 4.7e-34 148.3 139 55.4
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 4.7e-34 148.3 150 54.0
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 6.1e-34 147.9 131 58.8
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 6.1e-34 147.9 142 54.2
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 8.0e-34 147.5 135 59.3
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 1.4e-33 146.7 117 61.5
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 1.4e-33 146.7 150 55.3
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 1.4e-33 146.7 150 55.3
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.8e-33 146.4 151 55.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 3.0e-33 145.6 138 56.5
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 4.0e-33 145.2 144 55.6
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 6.8e-33 144.4 125 60.0
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 6.8e-33 144.4 124 57.3
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 6.8e-33 144.4 156 53.8
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 8.9e-33 144.1 129 58.9
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.2e-32 143.7 122 60.7
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 1.5e-32 143.3 143 57.3
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.5e-32 143.3 145 54.5
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 2.0e-32 142.9 125 58.4
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 2.0e-32 142.9 115 60.9
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.6e-32 142.5 109 65.1
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 2.6e-32 142.5 139 54.7
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 5.8e-32 141.4 126 58.7
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 5.8e-32 141.4 141 55.3
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 5.8e-32 141.4 112 60.7
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 7.5e-32 141.0 119 62.2
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 7.5e-32 141.0 145 52.4
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.3e-31 140.2 102 63.7
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.3e-31 140.2 126 57.1
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.3e-31 140.2 126 57.9
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.7e-31 139.8 134 53.7
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.7e-31 139.8 137 55.5
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.7e-31 139.8 122 57.4
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 2.9e-31 139.0 123 56.1
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 2.9e-31 139.0 144 53.5
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 2.9e-31 139.0 135 55.6
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 2.9e-31 139.0 142 50.7
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 3.7e-31 138.7 118 60.2
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 3.7e-31 138.7 122 58.2
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.7e-31 138.7 139 52.5
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 4.9e-31 138.3 153 49.7
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 8.3e-31 137.5 156 51.9
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 8.3e-31 137.5 138 55.1
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 1.1e-30 137.1 122 59.8
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 1.1e-30 137.1 127 58.3
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.1e-30 137.1 143 55.2
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.4e-30 136.7 116 61.2
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 1.4e-30 136.7 124 57.3
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 1.9e-30 136.3 118 57.6
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 5.4e-30 134.8 112 60.7
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 5.4e-30 134.8 117 60.7
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 7.0e-30 134.4 113 60.2
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 7.0e-30 134.4 156 48.7
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 1.6e-29 133.3 110 60.0
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.0e-29 132.9 128 55.5
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 2.0e-29 132.9 140 51.4
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 2.0e-29 132.9 140 51.4
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 2.0e-29 132.9 127 55.1
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 2.7e-29 132.5 132 53.0
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 2.7e-29 132.5 119 54.6
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 3.5e-29 132.1 134 50.7
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 3.5e-29 132.1 102 57.8
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 3.5e-29 132.1 139 49.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 4.6e-29 131.7 91 63.7
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 6.0e-29 131.3 109 56.9
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.3e-28 130.2 123 52.8
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.3e-28 130.2 121 53.7
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 1.7e-28 129.8 156 49.4
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 3.0e-28 129.0 132 50.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 6.6e-28 127.9 88 65.9
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.5e-27 126.7 87 67.8
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 3.3e-27 125.6 116 54.3
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 3.3e-27 125.6 116 54.3
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 3.3e-27 125.6 88 69.3
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 3.3e-27 125.6 74 73.0
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 1.2e-26 123.6 118 53.4
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 2.8e-26 122.5 88 62.5
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 3.6e-26 122.1 116 53.4
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 3.6e-26 122.1 116 53.4
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 4.7e-26 121.7 89 62.9
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 8.0e-26 120.9 93 60.2
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.8e-25 119.8 96 61.5
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 5.8e-24 114.8 163 44.8
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 7.5e-24 114.4 112 52.7
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.1e-22 110.5 109 52.3
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 4.1e-22 108.6 72 68.1
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.1e-19 100.5 100 53.0
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.4e-17 93.6 84 53.6
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 2.0e-16 89.7 90 48.9
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.7e-15 85.5 97 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 5.1e-12 75.1 88 43.2
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 3.3e-11 72.4 69 40.6
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 9.5e-11 70.9 77 46.8
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 2.4e-09 66.2 69 47.8
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 4.4e-08 62.0 102 35.3
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 5.4e-06 55.1 92 31.5


User provided reference genes

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