Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 1.2e-53 213.4 152 100.0
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 9.4e-30 134.0 151 74.8
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.6e-29 133.3 159 70.4
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.6e-29 133.3 164 69.5
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 4.0e-28 128.6 151 72.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 5.2e-28 128.3 161 70.8
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.2e-27 127.1 147 70.7
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 1.5e-27 126.7 151 68.2
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 2.0e-27 126.3 159 70.4
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.0e-27 126.3 154 72.7
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.6e-27 125.9 126 80.2
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 3.4e-27 125.6 159 67.3
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.4e-27 125.2 163 68.1
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.7e-27 124.8 163 66.9
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 5.7e-27 124.8 164 68.3
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 7.5e-27 124.4 164 67.7
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 7.5e-27 124.4 156 66.7
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 9.8e-27 124.0 159 67.3
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 9.8e-27 124.0 133 78.2
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.7e-26 123.2 166 65.7
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.7e-26 123.2 162 67.9
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.7e-26 123.2 163 67.5
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.2e-26 122.9 164 67.7
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 2.8e-26 122.5 149 69.8
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.8e-26 122.5 166 66.9
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.8e-26 122.5 166 66.9
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.8e-26 122.5 164 66.5
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 4.8e-26 121.7 160 68.1
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.8e-26 121.7 166 66.3
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 4.8e-26 121.7 165 65.5
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 6.3e-26 121.3 164 65.9
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 6.3e-26 121.3 153 71.2
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 1.1e-25 120.6 165 65.5
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.4e-25 120.2 159 66.7
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.4e-25 120.2 131 75.6
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.8e-25 119.8 164 65.9
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.4e-25 119.4 165 67.3
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 2.4e-25 119.4 116 80.2
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 2.4e-25 119.4 116 80.2
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 2.4e-25 119.4 165 66.7
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 3.1e-25 119.0 153 68.0
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 3.1e-25 119.0 165 63.0
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 3.1e-25 119.0 164 64.0
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 4.1e-25 118.6 159 66.7
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 4.1e-25 118.6 159 66.7
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.1e-25 118.6 159 68.6
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.1e-25 118.6 132 70.5
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 4.1e-25 118.6 140 73.6
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 7.0e-25 117.9 159 64.8
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 7.0e-25 117.9 168 63.7
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 7.0e-25 117.9 136 74.3
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 2.0e-24 116.3 126 61.9
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 2.0e-24 116.3 157 66.9
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.0e-24 116.3 163 65.6
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.7e-24 115.9 126 77.0
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 2.7e-24 115.9 159 64.8
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 3.5e-24 115.5 133 72.2
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 3.5e-24 115.5 131 76.3
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.5e-24 115.5 136 73.5
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 3.5e-24 115.5 128 74.2
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 4.5e-24 115.2 161 66.5
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 4.5e-24 115.2 135 74.1
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 7.7e-24 114.4 155 67.7
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 7.7e-24 114.4 161 66.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.3e-23 113.6 129 77.5
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.3e-23 113.6 145 69.7
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.2e-23 112.8 157 67.5
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 3.8e-23 112.1 129 74.4
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 5.0e-23 111.7 161 66.5
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.5e-22 110.2 166 60.8
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 1.9e-22 109.8 136 71.3
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 3.2e-22 109.0 160 63.1
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 4.2e-22 108.6 164 62.2
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 4.2e-22 108.6 164 63.4
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 4.2e-22 108.6 146 65.8
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 4.2e-22 108.6 166 60.8
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 9.5e-22 107.5 127 56.7
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 2.8e-21 105.9 132 68.9
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 4.7e-21 105.1 132 71.2
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 6.1e-21 104.8 131 68.7
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 8.0e-21 104.4 157 50.3
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.0e-20 104.0 144 66.0
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.4e-20 103.6 128 75.0
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.0e-20 102.4 134 69.4
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.0e-20 102.4 163 61.3
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 3.4e-19 99.0 112 72.3
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.7e-18 95.5 98 59.2
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 4.9e-18 95.1 119 73.1
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.4e-17 93.6 130 66.2
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.8e-17 93.2 92 56.5
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.8e-17 93.2 122 73.8
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 5.4e-17 91.7 96 58.3
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 3.5e-16 89.0 125 40.0
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.9e-14 83.2 128 66.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 7.3e-14 81.3 121 66.9
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 3.0e-12 75.9 89 66.3
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.5e-11 73.6 128 39.8
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.5e-11 73.6 114 63.2
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.2e-10 69.7 80 47.5
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.6e-08 63.5 114 33.3
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.7e-08 62.8 63 50.8
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 4.6e-08 62.0 146 56.2


User provided reference genes

Program Settings