Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 2.3e-185 652.1 344 100.0
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 3.8e-151 538.5 360 81.1
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 6.4e-151 537.7 319 85.6
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 1.1e-150 537.0 355 82.0
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 3.1e-145 518.8 314 82.5
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 1.4e-142 510.0 355 72.7
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 2.4e-142 509.2 327 79.2
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.3e-140 502.7 323 78.0
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 8.7e-140 500.7 312 80.8
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 4.3e-139 498.4 321 76.6
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 9.6e-139 497.3 298 81.9
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 6.2e-138 494.6 323 76.8
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 1.8e-137 493.0 307 79.8
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 2.4e-137 492.7 321 76.0
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 2.4e-137 492.7 325 76.6
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 3.1e-137 492.3 354 72.0
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 4.0e-137 491.9 299 80.6
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 1.2e-136 490.3 351 73.2
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 2.6e-136 489.2 330 75.2
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 2.6e-136 489.2 329 75.4
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 3.4e-136 488.8 316 77.8
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 5.8e-136 488.0 316 77.2
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 7.6e-136 487.6 313 78.0
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 9.9e-136 487.3 324 74.7
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 9.9e-136 487.3 324 74.7
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.3e-135 486.9 327 74.0
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 1.7e-135 486.5 308 78.2
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 1.7e-135 486.5 317 75.7
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 1.7e-135 486.5 329 75.1
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 2.2e-135 486.1 311 78.1
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 2.9e-135 485.7 299 79.3
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 2.9e-135 485.7 324 74.4
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 6.4e-135 484.6 309 77.3
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 8.4e-135 484.2 288 83.3
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 8.4e-135 484.2 302 78.1
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 1.1e-134 483.8 337 71.8
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 1.1e-134 483.8 336 70.8
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 1.1e-134 483.8 326 75.8
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 1.4e-134 483.4 338 73.1
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 1.4e-134 483.4 320 75.3
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 1.4e-134 483.4 307 78.2
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 2.4e-134 482.6 338 73.1
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 3.2e-134 482.3 342 72.8
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 3.2e-134 482.3 365 68.5
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 3.2e-134 482.3 331 74.6
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 4.2e-134 481.9 336 73.2
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 4.2e-134 481.9 326 76.1
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 7.1e-134 481.1 325 75.1
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 1.2e-133 480.3 338 72.8
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 1.2e-133 480.3 359 68.8
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.7e-133 479.2 339 70.8
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 2.7e-133 479.2 295 79.7
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 2.7e-133 479.2 337 70.9
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 3.5e-133 478.8 324 74.4
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 3.5e-133 478.8 291 80.4
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 4.6e-133 478.4 291 80.4
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 4.6e-133 478.4 297 79.1
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.3e-132 476.9 331 73.4
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 2.3e-132 476.1 325 73.2
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 2.3e-132 476.1 336 71.4
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 3.0e-132 475.7 342 70.2
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 3.9e-132 475.3 320 74.7
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 5.1e-132 474.9 354 70.6
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.1e-131 473.8 341 71.0
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 1.5e-131 473.4 310 76.1
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.5e-131 473.4 328 73.5
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 5.6e-131 471.5 300 77.3
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 7.4e-131 471.1 343 70.6
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 9.6e-131 470.7 325 72.6
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.3e-130 470.3 307 76.2
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 2.4e-129 466.1 309 76.1
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 3.1e-129 465.7 300 76.7
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 5.3e-129 464.9 317 75.1
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 1.2e-128 463.8 309 76.4
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 1.2e-128 463.8 337 70.9
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 4.5e-128 461.8 339 68.7
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 2.2e-127 459.5 309 75.7
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 3.8e-127 458.8 300 76.0
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 4.9e-127 458.4 327 72.2
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 1.1e-126 457.2 360 66.7
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 1.4e-126 456.8 316 70.9
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.5e-126 456.1 311 74.0
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 3.2e-126 455.7 295 76.3
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 5.5e-126 454.9 360 66.1
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 7.1e-126 454.5 378 65.1
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 2.1e-125 453.0 307 73.9
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 2.1e-125 453.0 358 66.5
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 4.6e-125 451.8 302 77.5
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 7.9e-125 451.1 328 68.3
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 7.9e-125 451.1 336 66.4
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 1.0e-124 450.7 322 71.4
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.9e-124 448.7 344 66.0
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 5.1e-124 448.4 264 82.6
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 5.1e-124 448.4 350 66.3
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 8.7e-124 447.6 332 66.6
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.1e-123 447.2 325 68.3
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 2.5e-123 446.0 322 69.3
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.3e-122 443.7 321 69.5
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 6.2e-122 441.4 306 72.9
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 3.1e-121 439.1 287 75.6
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 1.2e-120 437.2 293 75.1
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 1.0e-119 434.1 303 73.3
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.3e-119 433.7 322 67.7
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 1.3e-119 433.7 317 65.3
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 6.5e-119 431.4 310 68.7
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 1.6e-117 426.8 290 68.6
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 2.1e-117 426.4 299 66.6
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 3.0e-116 422.5 359 60.4
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 1.9e-115 419.9 309 67.0
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 4.3e-115 418.7 330 63.9
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 4.3e-115 418.7 330 63.9
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 5.7e-115 418.3 329 64.1
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 2.2e-114 416.4 329 63.5
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 3.7e-114 415.6 310 65.8
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 6.3e-114 414.8 333 63.1
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.1e-113 414.1 319 64.9
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 1.1e-113 414.1 312 66.0
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 1.1e-113 414.1 330 63.3
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 1.1e-113 414.1 292 74.0
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 1.8e-113 413.3 310 65.5
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 2.4e-113 412.9 330 63.3
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 1.5e-112 410.2 310 66.8
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.2e-111 406.4 262 77.1
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 8.5e-111 404.4 332 60.8
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 8.5e-111 404.4 332 60.8
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 8.5e-111 404.4 313 63.6
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 7.2e-110 401.4 313 63.3
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 2.7e-109 399.4 287 65.9
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 3.6e-109 399.1 309 65.0
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 4.6e-109 398.7 322 61.8
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 1.8e-108 396.7 310 67.1
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 6.5e-103 378.3 313 61.0
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 6.7e-100 368.2 273 66.7
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 1.3e-98 364.0 312 63.5
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 9.1e-97 357.8 329 56.5
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 9.1e-97 357.8 291 64.3
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 2.7e-93 346.3 287 65.9
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 5.7e-91 338.6 322 55.0
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 1.3e-90 337.4 198 85.4
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 3.1e-89 332.8 264 64.0
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 1.0e-87 327.8 205 80.5
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 1.6e-85 320.5 302 53.3
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 1.4e-84 317.4 194 82.0
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.4e-84 317.4 273 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 2.6e-83 313.2 315 55.2
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 4.4e-83 312.4 315 52.7
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 4.5e-80 302.4 196 76.0
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 3.0e-76 289.7 184 77.7
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 1.2e-75 287.7 181 77.9
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 3.1e-73 279.6 269 57.2
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 4.1e-73 279.3 205 70.2
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 3.2e-65 253.1 284 46.8
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 9.8e-51 204.9 119 86.6
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 4.7e-45 186.0 180 57.2
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 1.1e-44 184.9 113 77.0
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 2.0e-43 180.6 118 72.9
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 4.9e-42 176.0 125 69.6
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 6.8e-36 155.6 97 75.3
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 2.0e-35 154.1 108 72.2
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 1.7e-26 124.4 86 65.1
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 6.6e-23 112.5 268 28.4
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 3.4e-19 100.1 284 28.2


User provided reference genes

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