Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44789 Striga asiatica HOM05D008490 ORTHO05D010725 9.4e-144 513.5 251 100.0
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 4.3e-19 99.4 50 88.0
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 7.3e-19 98.6 48 91.7
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 7.3e-19 98.6 48 91.7
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 7.3e-19 98.6 48 91.7
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 2.1e-18 97.1 48 89.6
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 3.6e-18 96.3 140 45.7
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 3.4e-16 89.7 123 49.6
PGSC0003DMG400023070 Solanum tuberosum HOM05D008490 ORTHO05D010725 2.3e-12 77.0 47 78.7
Actinidia34941 Actinidia chinensis HOM05D008490 ORTHO05D010725 8.6e-12 75.1 41 87.8
CDE02G3985 Ceratophyllum demersum HOM05D008490 ORTHO05D010725 1.2e-10 71.2 40 92.5
SGA_v2.0_scaffold11G05597 Striga asiatica HOM05D008490 ORTHO05D010725 5.8e-08 62.4 28 96.4
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 2.2e-07 60.5 33 84.8
Potri.007G062081 Populus trichocarpa HOM05D008490 ORTHO05D036895 2.2e-07 60.5 33 81.8
Nitab4.5_0000866g0160 Nicotiana tabacum HOM05D008490 ORTHO05D010725 3.7e-07 59.7 83 47.0
Nitab4.5_0010333g0090 Nicotiana tabacum HOM05D009956 ORTHO05D012211 1.9e-06 57.4 85 49.4
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 7.0e-06 55.5 41 65.9


User provided reference genes

Program Settings