Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44753 Striga asiatica HOM05D000003 ORTHO05D000006 5.0e-176 620.9 296 100.0
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.3e-10 70.1 70 50.0
QL03p038298 Quercus lobata HOM05D000003 ORTHO05D000006 6.1e-09 65.9 142 33.1
COL.COLO4_05807 Corchorus olitorius HOM05D000003 ORTHO05D000006 8.0e-09 65.5 103 35.9
TPR.G27282 Trifolium pratense HOM05D000003 ORTHO05D000006 2.3e-08 63.9 75 40.0
Cpa.g.sc263.17 Carica papaya HOM05D000003 ORTHO05D000006 3.0e-08 63.5 63 46.0
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.0e-08 63.2 66 43.9
Atru.chr9.1331 Acer truncatum HOM05D000003 ORTHO05D000006 6.8e-08 62.4 64 46.9
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-08 62.0 68 42.6
AUR62029848 Chenopodium quinoa HOM05D000003 ORTHO05D000006 8.9e-08 62.0 55 45.5
TPR.G28475 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-07 61.6 71 42.3
TPR.G35113 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-07 61.6 75 38.7
BcaC04g18821 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-07 60.8 88 36.4
Atru.chr2.1277 Acer truncatum HOM05D000003 ORTHO05D000006 2.6e-07 60.5 70 38.6
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 2.6e-07 60.5 68 41.2
Rhsim08G0149800 Rhododendron simsii HOM05D000001 ORTHO05D008374 2.6e-07 60.5 68 45.6
QL04p086524 Quercus lobata HOM05D000003 ORTHO05D000006 3.4e-07 60.1 70 42.9
QL12p038026 Quercus lobata HOM05D022054 ORTHO05D000006 3.4e-07 60.1 113 35.4
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-07 60.1 64 40.6
TPR.G18288 Trifolium pratense HOM05D000003 ORTHO05D000006 3.4e-07 60.1 65 40.0
TAR391G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 3.4e-07 60.1 165 27.3
Atru.chr9.1186 Acer truncatum HOM05D000003 ORTHO05D000006 4.4e-07 59.7 54 51.9
CANSAT35G0462 Cannabis sativa HOM05D000003 ORTHO05D000006 4.4e-07 59.7 129 29.5
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 4.4e-07 59.7 65 40.0
FvH4_2g11954 Fragaria vesca HOM05D000003 ORTHO05D000006 5.7e-07 59.3 60 41.7
Atru.chr5.1908 Acer truncatum HOM05D000003 ORTHO05D000006 7.5e-07 58.9 54 51.9
FvH4_2g12002 Fragaria vesca HOM05D000003 ORTHO05D000006 7.5e-07 58.9 56 42.9
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 7.5e-07 58.9 87 34.5
Atru.chr13.1144 Acer truncatum HOM05D000003 ORTHO05D000006 9.8e-07 58.5 64 43.8
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-07 58.5 68 41.2
AUR62013845 Chenopodium quinoa HOM05D000003 ORTHO05D000006 9.8e-07 58.5 67 43.3
Psat4g174680 Pisum sativum HOM05D012017 ORTHO05D000006 9.8e-07 58.5 68 47.1
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.8e-07 58.5 101 33.7
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 9.8e-07 58.5 64 40.6
COL.COLO4_04425 Corchorus olitorius HOM05D000003 ORTHO05D000006 1.3e-06 58.2 111 27.0
MBI11_g29571_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.3e-06 58.2 58 46.6
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 1.3e-06 58.2 68 39.7
CiPaw.01G042200 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.7e-06 57.8 72 38.9
Rhsim01G0092300 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.7e-06 57.8 53 43.4
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 86 34.9
TPR.G22879 Trifolium pratense HOM05D000024 ORTHO05D000006 1.7e-06 57.8 71 38.0
Atru.chr1.1904 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-06 57.4 71 38.0
Atru.chr4.3089 Acer truncatum HOM05D000003 ORTHO05D000126 2.2e-06 57.4 63 42.9
PSO782G4947 Papaver somniferum HOM05D000003 ORTHO05D000006 2.2e-06 57.4 58 44.8
Actinidia10466 Actinidia chinensis HOM05D000003 ORTHO05D000006 2.9e-06 57.0 60 48.3
EL10Ac3g06059 Beta vulgaris HOM05D000003 ORTHO05D000006 2.9e-06 57.0 92 35.9
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-06 57.0 71 39.4
Atru.chr1.2428 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-06 56.6 68 39.7
Atru.chr13.1676 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-06 56.6 91 38.5
Atru.chr13.2319 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-06 56.6 68 38.2
Atru.chr9.887 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-06 56.6 64 45.3
Atru.ctg24.7 Acer truncatum HOM05D000003 ORTHO05D000006 3.7e-06 56.6 62 46.8
MBI07_g33314_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 3.7e-06 56.6 64 45.3
MBI18_g11932_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.7e-06 56.6 73 46.6
Potri.003G010697 Populus trichocarpa HOM05D000003 ORTHO05D000006 3.7e-06 56.6 58 43.1
QL05p024765 Quercus lobata HOM05D000003 ORTHO05D000006 3.7e-06 56.6 70 44.3
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 69 42.0
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 54 48.1
Atru.chr7.1912 Acer truncatum HOM05D000003 ORTHO05D000006 4.9e-06 56.2 63 42.9
Atru.chr8.1059 Acer truncatum HOM05D000024 ORTHO05D000006 4.9e-06 56.2 69 42.0
Nitab4.5_0000697g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.9e-06 56.2 58 46.6
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.9e-06 56.2 59 40.7
Rhsim08G0129100 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.9e-06 56.2 53 43.4
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-06 56.2 86 33.7
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 4.9e-06 56.2 78 34.6
BcaC04g19510 Brassica carinata HOM05D000003 ORTHO05D000006 6.4e-06 55.8 54 42.6
Rhsim01G0274800 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.4e-06 55.8 53 43.4
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 6.4e-06 55.8 64 37.5
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-06 55.8 54 46.3
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-06 55.5 69 42.0
Rhsim09G0070000 Rhododendron simsii HOM05D000003 ORTHO05D000006 8.3e-06 55.5 53 45.3
Rhsim11G0021500 Rhododendron simsii HOM05D002187 ORTHO05D002243 8.3e-06 55.5 63 41.3


User provided reference genes

Program Settings