Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 3.1e-284 981.1 490 100.0
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 5.4e-95 352.4 361 58.4
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 5.4e-95 352.4 361 58.4
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 1.8e-90 337.4 265 70.9
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 9.0e-90 335.1 306 64.7
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.3e-88 331.3 306 64.4
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 1.3e-88 331.3 264 70.8
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 8.4e-88 328.6 288 65.3
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 1.0e-85 321.6 254 71.3
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 2.3e-85 320.5 267 67.0
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 8.1e-83 312.0 259 68.0
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 1.7e-80 304.3 250 69.2
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 2.2e-80 303.9 245 70.2
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.4e-79 301.2 220 75.5
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 5.5e-79 299.3 252 68.3
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 4.6e-78 296.2 261 64.8
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 1.0e-77 295.0 252 67.5
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 2.3e-77 293.9 226 72.6
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 3.9e-77 293.1 273 61.5
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.5e-76 291.2 252 65.5
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.5e-76 291.2 252 65.5
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 4.3e-76 289.7 323 53.6
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 5.7e-76 289.3 252 64.7
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 5.7e-76 289.3 252 64.7
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 5.7e-76 289.3 252 64.7
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 5.7e-76 289.3 252 64.7
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 5.7e-76 289.3 252 64.7
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 7.4e-76 288.9 253 64.4
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 8.2e-75 285.4 259 62.9
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 4.6e-70 269.6 239 65.3
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 4.3e-68 263.1 179 80.4
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 9.7e-68 261.9 223 67.3
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 1.4e-66 258.1 239 64.4
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 1.8e-66 257.7 246 61.0
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 6.5e-64 249.2 215 66.0
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 4.1e-58 229.9 260 55.4
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 5.3e-58 229.6 260 55.0
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 4.5e-57 226.5 206 63.6
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 4.5e-57 226.5 206 63.6
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 7.7e-57 225.7 251 56.6
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 1.7e-56 224.6 245 54.3
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 6.5e-56 222.6 206 62.6
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 1.4e-55 221.5 159 76.7
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 1.3e-51 208.4 150 76.7
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 7.7e-49 199.1 155 69.7
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 3.6e-46 190.3 231 53.7
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 6.1e-46 189.5 161 68.3
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 1.0e-45 188.7 200 56.5
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 7.5e-44 182.6 215 54.9
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 2.9e-40 170.6 186 56.5
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 4.0e-37 160.2 137 65.7
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 2.6e-36 157.5 114 75.4
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 4.4e-36 156.8 114 75.4
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.7e-35 154.8 121 75.2
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-35 154.1 114 74.6
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 2.4e-34 151.0 250 43.2
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 7.0e-34 149.4 119 69.7
SHI35295 Sapria himalayana HOM05D006604 ORTHO05D007974 1.3e-32 145.2 180 51.7
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 6.5e-32 142.9 114 71.9
Nitab4.5_0002404g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.5e-31 141.7 128 61.7
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 5.5e-31 139.8 80 88.8
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 1.6e-30 138.3 97 76.3
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 1.6e-30 138.3 97 76.3
unitig_87.g28014 Utricularia gibba HOM05D006604 ORTHO05D007974 2.1e-30 137.9 71 94.4
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 8.0e-30 136.0 73 93.2
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 1.0e-29 135.6 91 80.2
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 8.8e-29 132.5 70 91.4
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 8.8e-29 132.5 67 97.0
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 2.0e-28 131.3 72 90.3
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 2.0e-28 131.3 73 90.4
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 4.4e-28 130.2 70 91.4
arahy.Tifrunner.gnm1.ann1.I4ZC3D Arachis hypogaea HOM05D006604 ORTHO05D007974 2.8e-27 127.5 127 55.1
SHI35759 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-27 127.5 71 87.3
C01p34770 Brassica napus HOM05D013555 ORTHO05D016062 4.1e-26 123.6 94 68.1
BolC1t03444H Brassica oleracea HOM05D006604 ORTHO05D007974 1.2e-25 122.1 71 80.3
Aa31csc464G30 Aethionema arabicum HOM05D006604 ORTHO05D007974 2.7e-25 120.9 92 64.1
SHI35478 Sapria himalayana HOM05D006604 ORTHO05D007974 3.5e-25 120.6 71 85.9
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 5.9e-25 119.8 112 64.3
C01p34870 Brassica napus HOM05D013555 ORTHO05D016062 7.7e-25 119.4 94 64.9
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 5.0e-24 116.7 119 57.1
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 8.6e-24 115.9 62 90.3
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 3.3e-23 114.0 126 57.9
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 7.3e-23 112.8 100 63.0
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 3.6e-22 110.5 61 90.2
Nn2g15525 Nelumbo nucifera HOM05D006604 ORTHO05D007974 8.0e-22 109.4 57 94.7
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 1.4e-21 108.6 75 69.3
arahy.Tifrunner.gnm1.ann1.NC5V37 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.4e-21 108.6 75 69.3
Os12g0424180 Oryza sativa ssp. japonica HOM05D006604 ORTHO05D007974 6.8e-21 106.3 120 52.5
Nn6g31985 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.2e-20 105.5 57 89.5
GSVIVG01023423001 Vitis vinifera HOM05D006604 ORTHO05D007974 1.3e-19 102.1 57 86.0
Oeu030840.1 Olea europaea HOM05D000743 ORTHO05D000580 8.3e-19 99.4 94 53.2
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 1.1e-18 99.0 75 69.3
MELO3C034885.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.8e-18 98.2 90 64.4
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 7.0e-18 96.3 117 54.7
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 3.0e-16 90.9 52 86.5
Nitab4.5_0005246g0050 Nicotiana tabacum HOM05D006604 ORTHO05D007974 7.3e-15 86.3 166 41.0
EL10Ac2g04656 Beta vulgaris HOM05D001314 ORTHO05D001165 3.6e-14 84.0 86 55.8
Medtr8g077470 Medicago truncatula HOM05D006604 ORTHO05D007974 6.2e-14 83.2 54 72.2
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 6.2e-14 83.2 77 64.9
SHI33922 Sapria himalayana HOM05D006604 ORTHO05D007974 1.0e-13 82.4 53 71.7
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 2.3e-13 81.3 51 78.4
EL10Ac8g19070 Beta vulgaris HOM05D007194 ORTHO05D009182 5.8e-12 76.6 194 33.0
SHI35935 Sapria himalayana HOM05D006604 ORTHO05D007974 5.8e-12 76.6 42 85.7
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 7.5e-12 76.3 52 76.9
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 6.4e-11 73.2 130 36.9
Glyma.01G103450 Glycine max HOM05D006604 ORTHO05D007974 1.1e-10 72.4 42 83.3
Nitab4.5_0002418g0090 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.4e-10 72.0 44 81.8
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 3.2e-10 70.9 100 47.0
SHI51349 Sapria himalayana HOM05D006604 ORTHO05D007974 6.0e-09 66.6 36 83.3
ClCG07G016010 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.7e-08 65.1 34 91.2
Eucgr.D01303 Eucalyptus grandis HOM05D006604 ORTHO05D007974 5.0e-08 63.5 31 90.3
SHI01303 Sapria himalayana HOM05D006604 ORTHO05D007974 8.6e-08 62.8 42 78.6
Cre01.g018800 Chlamydomonas reinhardtii HOM05D006604 ORTHO05D007974 1.1e-07 62.4 116 37.9
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 1.5e-07 62.0 38 84.2
SHI27524 Sapria himalayana HOM05D006604 ORTHO05D007974 4.3e-07 60.5 143 37.8
SHI36366 Sapria himalayana HOM05D006604 ORTHO05D007974 4.3e-07 60.5 32 90.6
ClCG06G014670 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.6e-06 58.5 36 83.3
ECA003G0002 Erigeron canadensis HOM05D006604 ORTHO05D007974 2.1e-06 58.2 36 83.3
SHI12109 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-06 57.8 35 77.1
SHI12053 Sapria himalayana HOM05D006604 ORTHO05D007974 6.2e-06 56.6 42 69.0
SHI37563 Sapria himalayana HOM05D006604 ORTHO05D007974 6.2e-06 56.6 30 90.0
SHI36696 Sapria himalayana HOM05D006604 ORTHO05D007974 8.1e-06 56.2 28 92.9
SHI50563 Sapria himalayana HOM05D006604 ORTHO05D007974 8.1e-06 56.2 28 92.9


User provided reference genes

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