Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.2e-96 355.5 170 100.0
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.8e-93 345.9 170 97.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.8e-93 345.9 170 97.1
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.3e-93 345.5 170 96.5
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 2.3e-93 345.5 169 97.6
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 3.0e-93 345.1 170 96.5
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 3.0e-93 345.1 170 96.5
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 3.9e-93 344.7 170 97.1
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 3.9e-93 344.7 170 97.1
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 3.9e-93 344.7 170 97.1
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 5.1e-93 344.4 170 96.5
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 6.7e-93 344.0 170 96.5
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 6.7e-93 344.0 170 96.5
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 6.7e-93 344.0 170 96.5
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 6.7e-93 344.0 170 96.5
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 6.7e-93 344.0 170 96.5
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 8.8e-93 343.6 169 97.0
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 1.1e-92 343.2 170 95.9
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.5e-92 342.8 170 95.9
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.5e-92 342.8 170 95.9
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 3.3e-92 341.7 170 95.9
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.3e-92 341.3 170 95.3
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 9.7e-92 340.1 170 95.9
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 9.7e-92 340.1 170 95.9
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.7e-91 338.2 170 95.3
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 4.8e-91 337.8 170 95.3
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.4e-90 336.3 170 95.3
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.8e-90 335.9 170 94.1
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 4.1e-90 334.7 167 95.2
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 9.1e-90 333.6 170 93.5
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 3.4e-89 331.6 168 94.6
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 3.4e-89 331.6 168 94.6
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 7.7e-89 330.5 170 93.5
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 7.7e-89 330.5 170 93.5
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 7.7e-89 330.5 170 93.5
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-88 329.7 170 93.5
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-88 329.7 170 93.5
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.3e-88 329.7 164 94.5
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.3e-88 329.7 164 94.5
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.7e-88 329.3 166 94.6
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.2e-88 328.9 168 94.0
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.9e-88 328.6 167 92.8
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 8.5e-88 327.0 167 92.2
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-88 327.0 170 92.4
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.4e-87 326.2 170 92.4
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 9.4e-87 323.6 169 92.9
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 4.7e-86 321.2 170 90.6
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 6.1e-86 320.9 166 92.8
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-85 320.1 170 91.2
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.9e-85 318.2 167 91.0
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-85 318.2 163 93.3
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 5.2e-85 317.8 167 90.4
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.1e-84 316.6 170 90.0
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.3e-83 313.2 170 90.0
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.7e-83 312.8 168 89.9
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.8e-82 309.3 158 93.0
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-81 306.6 166 88.6
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-81 304.3 170 85.9
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-78 295.8 169 86.4
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-77 292.7 164 86.6
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 4.0e-77 291.6 170 83.5
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 2.0e-76 289.3 144 95.1
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 7.5e-76 287.3 141 97.2
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 7.5e-76 287.3 141 97.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.7e-75 286.2 170 82.4
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 2.2e-75 285.8 167 85.0
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 3.1e-74 282.0 153 89.5
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.6e-73 279.6 144 93.1
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 3.8e-72 275.0 163 81.6
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-71 271.2 147 89.1
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-71 270.4 138 94.2
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.7e-70 268.9 135 94.8
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 2.7e-70 268.9 170 80.0
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-68 263.5 135 92.6
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-68 261.9 141 88.7
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-68 261.2 144 88.2
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 8.3e-67 257.3 143 87.4
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-66 256.9 138 89.9
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-66 256.9 138 89.9
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-65 253.1 132 90.9
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-65 251.1 131 90.8
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-64 248.1 148 81.8
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-63 246.9 167 72.5
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 7.2e-63 244.2 170 75.9
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.6e-62 243.0 124 93.5
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-60 236.5 136 85.3
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-57 224.6 138 82.6
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-55 220.3 127 84.3
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-55 218.8 134 82.8
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-55 218.8 133 82.7
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 4.3e-55 218.4 114 91.2
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.6e-54 216.5 114 91.2
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 4.0e-53 211.8 100 98.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 2.6e-52 209.1 99 98.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 7.5e-52 207.6 109 90.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.7e-51 206.5 132 78.8
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.2e-51 206.1 97 97.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 2.9e-51 205.7 96 99.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 2.9e-51 205.7 99 97.0
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 5.4e-50 201.4 132 78.0
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.2e-49 200.3 138 73.9
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-48 195.3 115 84.3
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.9e-48 195.3 102 90.2
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 8.6e-48 194.1 153 58.8
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.4e-45 186.8 149 57.0
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-45 186.8 100 88.0
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 4.0e-45 185.3 99 87.9
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 5.2e-45 184.9 115 80.9
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.2e-43 179.5 101 84.2
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-43 177.9 94 88.3
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 1.2e-41 173.7 79 98.7
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.6e-41 171.8 127 69.3
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 5.0e-40 168.3 87 94.3
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 5.0e-40 168.3 89 89.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-39 166.8 136 66.2
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 2.5e-39 166.0 164 57.3
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-37 157.9 87 83.9
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-37 157.9 87 83.9
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-37 157.5 170 52.4
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-36 156.8 147 57.8
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 2.0e-36 156.4 74 97.3
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.0e-36 156.4 74 97.3
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 1.3e-35 153.7 74 95.9
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 1.3e-35 153.7 74 95.9
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 1.3e-35 153.7 74 95.9
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 1.3e-35 153.7 74 95.9
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.7e-35 153.3 74 93.2
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.2e-35 152.9 91 81.3
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 7.1e-34 147.9 71 94.4
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-33 146.7 81 84.0
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.0e-32 144.1 143 51.0
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-32 143.7 72 91.7
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-32 142.5 75 92.0
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 8.6e-32 141.0 74 87.8
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 8.6e-32 141.0 144 54.9
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-31 139.8 74 87.8
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 4.3e-31 138.7 74 87.8
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-31 138.3 74 86.5
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-31 137.9 74 86.5
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.6e-30 136.7 74 85.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-30 135.2 70 90.0
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-30 135.2 72 87.5
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-30 134.8 137 57.7
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-30 134.8 137 57.7
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-29 134.0 74 85.1
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-29 133.3 122 58.2
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-29 132.1 72 84.7
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-28 129.8 74 83.8
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-28 128.6 74 83.8
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 4.4e-28 128.6 64 95.3
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-27 127.1 71 84.5
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-27 124.4 74 81.1
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 8.4e-27 124.4 64 90.6
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.6e-24 114.8 64 84.4
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 7.3e-23 111.3 69 79.7
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 4.7e-22 108.6 59 91.5
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 2.4e-21 106.3 61 88.5
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.2e-19 99.8 72 69.4
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 3.5e-17 92.4 47 87.2
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 4.6e-17 92.0 58 77.6
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-17 91.7 69 66.7
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-16 89.0 111 48.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.7e-16 87.8 44 93.2
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.9e-13 78.2 45 77.8
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-11 72.4 50 70.0
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 4.9e-11 72.0 36 91.7
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-10 69.7 100 46.0
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.1e-09 66.6 35 85.7
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 1.3e-08 63.9 30 93.3
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 1.8e-08 63.5 30 90.0
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-08 61.2 34 82.4
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 1.9e-07 60.1 29 89.7
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-07 58.5 33 84.8


User provided reference genes

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