Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44608 Striga asiatica HOM05D000743 ORTHO05D000580 1.1e-125 453.4 228 100.0
SGA_v2.0_scaffold400G50835 Striga asiatica HOM05D000743 ORTHO05D000580 1.3e-06 57.8 42 69.0
Lalb_Chr00c29g0408021 Lupinus albus HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
Lalb_Chr10g0094131 Lupinus albus HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
unitig_87.g27985 Utricularia gibba HOM05D000743 ORTHO05D000580 1.7e-06 57.4 48 62.5
VMungo0464G1519 Vigna mungo HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
Zm00001eb238260 Zea mays HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
Zm00001eb434640 Zea mays HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
Zm00001eb437040 Zea mays HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
Zm00001eb442780 Zea mays HOM05D000743 ORTHO05D000580 1.7e-06 57.4 42 69.0
ECA039G0005 Erigeron canadensis HOM05D002965 ORTHO05D010536 2.2e-06 57.0 115 38.3
HanXRQChr10g0297121 Helianthus annuus HOM05D000743 ORTHO05D000580 2.2e-06 57.0 42 66.7
Lsat_1_v5_gn_8_134580 Lactuca sativa HOM05D000743 ORTHO05D000580 2.2e-06 57.0 42 66.7
Zm00001eb436190 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb436240 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb436300 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb436340 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb436480 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb437490 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb437510 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb441850 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb442490 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
Zm00001eb442880 Zea mays HOM05D000743 ORTHO05D000580 2.2e-06 57.0 34 79.4
TPR.G18523 Trifolium pratense HOM05D000743 ORTHO05D000580 2.9e-06 56.6 42 69.0
CANSAT16G0054 Cannabis sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
CAN.G713.19 Capsicum annuum HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
ECA003G0005 Erigeron canadensis HOM05D002965 ORTHO05D000580 3.7e-06 56.2 42 66.7
ECA039G0013 Erigeron canadensis HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
ECA238G4293 Erigeron canadensis HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
HanXRQChr00c0055g0571381 Helianthus annuus HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
HanXRQChr14g0434331 Helianthus annuus HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
HanXRQMTg0579551 Helianthus annuus HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_0_17620 Lactuca sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_0_38060 Lactuca sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_0_43360 Lactuca sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_2_51020 Lactuca sativa HOM05D000580 ORTHO05D001362 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_5_148960 Lactuca sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_5_181820 Lactuca sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lsat_1_v5_gn_9_53101 Lactuca sativa HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lj2A1231T102 Lonicera japonica HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lj2C1236T50 Lonicera japonica HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Lj2P1232T89 Lonicera japonica HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Peaxi162Scf00625g00027 Petunia axillaris HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
QL06p018440 Quercus lobata HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
SalBow1G7966 Salvia bowleyana HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Solyc00g500358.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Sopen00g001040 Solanum pennellii HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
TAR477G0001 Trochodendron aralioides HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
TAR628G1600 Trochodendron aralioides HOM05D000743 ORTHO05D000580 3.7e-06 56.2 42 66.7
Ah.10g028530 Amaranthus hybridus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
EL10Ac5g11445 Beta vulgaris HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
AUR62030348 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
AUR62043899 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
AUR62043916 Chenopodium quinoa HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Dinv06721 Davidia involucrata HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Gohir.D06G053900 Gossypium hirsutum HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Gorai.013G213000 Gossypium raimondii HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Hma1.2p1_0547F.1_g176650 Hydrangea macrophylla HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
LjContig00439g0018024 Lotus japonicus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Lalb_Chr01g0011011 Lupinus albus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Nn003s41390 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Nn1g09935 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Nn1g09962 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Nn1g10146 Nelumbo nucifera HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
RcHm_v2.0_Chr5g0029951 Rosa chinensis HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
RcHm_v2.0_MTg0498251 Rosa chinensis HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Hund12892 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Hund28637 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Hund28902 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Hund29815 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Hund30932 Selenicereus undatus HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Sc11g0004370 Simmondsia chinensis HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Thecc.02G216100 Theobroma cacao HOM05D000743 ORTHO05D000580 4.9e-06 55.8 42 66.7
Aqoxy4G01617 Aquilegia oxysepala HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 76.5
CDE02G1641 Ceratophyllum demersum HOM05D000743 ORTHO05D000580 6.4e-06 55.5 70 48.6
Potri.007G062242 Populus trichocarpa HOM05D000743 ORTHO05D000580 6.4e-06 55.5 42 66.7
PGR028G0002 Punica granatum HOM05D000743 ORTHO05D000580 6.4e-06 55.5 42 64.3
SabraMtG0010000 Salix brachista HOM05D000743 ORTHO05D000580 6.4e-06 55.5 42 66.7
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-06 55.5 34 73.5
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI34625 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 90 43.3
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-06 55.5 34 73.5
SHI36371 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-06 55.5 34 73.5
SHI36936 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI38845 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI46272 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI50288 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
SHI53551 Sapria himalayana HOM05D000743 ORTHO05D000580 6.4e-06 55.5 34 73.5
AUR62034209 Chenopodium quinoa HOM05D000743 ORTHO05D000580 8.4e-06 55.1 33 81.8
Dinv02153 Davidia involucrata HOM05D000743 ORTHO05D000580 8.4e-06 55.1 42 66.7
Peaxi162Scf00588g00111 Petunia axillaris HOM05D001325 ORTHO05D005438 8.4e-06 55.1 42 64.3
Psat7g093400 Pisum sativum HOM05D000743 ORTHO05D000580 8.4e-06 55.1 42 66.7
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 8.4e-06 55.1 42 66.7
RhsimMtG0007400 Rhododendron simsii HOM05D000743 ORTHO05D000580 8.4e-06 55.1 42 66.7
SHI36078 Sapria himalayana HOM05D000743 ORTHO05D007069 8.4e-06 55.1 34 70.6
SHI43453 Sapria himalayana HOM05D000743 ORTHO05D000580 8.4e-06 55.1 34 70.6


User provided reference genes

Program Settings