Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold245G44599 Striga asiatica HOM05D008580 ORTHO05D010833 6.9e-119 430.6 215 100.0
Cfa023042 Carpinus fangiana HOM05D008580 ORTHO05D010833 1.9e-39 166.8 240 46.7
Oeu049592.1 Olea europaea HOM05D008580 ORTHO05D010833 4.1e-39 165.6 82 98.8
Gorai.001G166600 Gossypium raimondii HOM05D008580 ORTHO05D010833 5.4e-39 165.2 200 51.0
Sabra18G0084100 Salix brachista HOM05D008580 ORTHO05D010833 6.0e-38 161.8 175 57.1
SHI24206 Sapria himalayana HOM05D008580 ORTHO05D010833 3.9e-37 159.1 168 58.9
Nitab4.5_0000085g0070 Nicotiana tabacum HOM05D008580 ORTHO05D010833 1.4e-26 124.0 84 77.4
Potri.007G061941 Populus trichocarpa HOM05D008580 ORTHO05D010833 6.9e-26 121.7 86 75.6
SabraMtG0002100 Salix brachista HOM05D008580 ORTHO05D010833 6.9e-26 121.7 86 75.6
BcaC08g43708 Brassica carinata HOM05D011356 ORTHO05D013405 8.9e-26 121.3 97 69.1
Dinv06697 Davidia involucrata HOM05D008580 ORTHO05D010833 8.9e-26 121.3 64 92.2
Actinidia34893 Actinidia chinensis HOM05D008580 ORTHO05D010833 1.5e-25 120.6 64 92.2
Ca_14828_v3 Cicer arietinum L. HOM05D008580 ORTHO05D010833 2.6e-25 119.8 165 50.9
Aqoxy12s020 Aquilegia oxysepala HOM05D008580 ORTHO05D010833 2.9e-24 116.3 84 72.6
Ah.09g227230 Amaranthus hybridus HOM05D008580 ORTHO05D010833 1.9e-23 113.6 77 76.6
Ah.10g028220 Amaranthus hybridus HOM05D008580 ORTHO05D010833 1.9e-23 113.6 77 76.6
Ah.10g028770 Amaranthus hybridus HOM05D008580 ORTHO05D010833 1.9e-23 113.6 77 76.6
Sc12g0009240 Simmondsia chinensis HOM05D008580 ORTHO05D010833 6.0e-22 108.6 64 82.8
CAN.G1001.37 Capsicum annuum HOM05D008580 ORTHO05D010833 1.3e-21 107.5 64 81.2
Gohir.D06G002900 Gossypium hirsutum HOM05D008580 ORTHO05D010833 2.3e-21 106.7 64 79.7
Sp3g25760 Schrenkiella parvula HOM05D008580 ORTHO05D010833 5.1e-21 105.5 64 81.2
EL10Ac5g11443 Beta vulgaris HOM05D008580 ORTHO05D010833 1.5e-20 104.0 74 74.3
Nitab4.5_0000172g1680 Nicotiana tabacum HOM05D008580 ORTHO05D010833 4.3e-20 102.4 82 65.9
COL.COLO4_28185 Corchorus olitorius HOM05D008580 ORTHO05D010833 5.6e-20 102.1 84 64.3
PGSC0003DMG400009578 Solanum tuberosum HOM05D008580 ORTHO05D010833 1.3e-19 100.9 80 67.5
Nitab4.5_0007077g0010 Nicotiana tabacum HOM05D008580 ORTHO05D010833 3.1e-18 96.3 49 89.8
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 4.0e-18 95.9 58 77.6
CAN.G380.4 Capsicum annuum HOM05D008580 ORTHO05D010833 4.5e-17 92.4 58 77.6
SHI13992 Sapria himalayana HOM05D008580 ORTHO05D010833 1.9e-15 87.0 59 74.6
PGSC0003DMG400034858 Solanum tuberosum HOM05D008580 ORTHO05D010833 1.0e-13 81.3 64 62.5
GSVIVG01002724001 Vitis vinifera HOM05D008580 ORTHO05D010833 1.1e-12 77.8 41 92.7
AUR62017274 Chenopodium quinoa HOM05D008580 ORTHO05D010833 2.1e-11 73.6 42 83.3
Psat0s1330g0400 Pisum sativum HOM05D008580 ORTHO05D010833 3.6e-11 72.8 41 87.8
Nitab4.5_0001788g0370 Nicotiana tabacum HOM05D008580 ORTHO05D010833 1.4e-10 70.9 82 51.2
SHI13996 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-10 70.1 40 87.5
MELO3C029526.2 Cucumis melo HOM05D008580 ORTHO05D010833 1.4e-07 60.8 35 85.7
MELO3C031092.2 Cucumis melo HOM05D008580 ORTHO05D010833 1.4e-07 60.8 35 85.7
MELO3C001327.2 Cucumis melo HOM05D008580 ORTHO05D010833 1.2e-06 57.8 40 75.0
BcaC05g26877 Brassica carinata HOM05D008580 ORTHO05D010833 2.1e-06 57.0 36 83.3
MELO3C030344.2 Cucumis melo HOM05D008580 ORTHO05D010833 2.1e-06 57.0 35 80.0


User provided reference genes

Program Settings