Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold244G44377 Striga asiatica HOM05D010852 ORTHO05D002376 7.2e-155 550.4 261 100.0
SGA_v2.0_scaffold237G43867 Striga asiatica HOM05D010852 ORTHO05D002376 2.0e-48 196.8 151 65.6
SGA_v2.0_scaffold237G43840 Striga asiatica HOM05D010852 ORTHO05D002376 6.8e-36 155.2 153 44.4
SGA_v2.0_scaffold29G12331 Striga asiatica HOM05D010852 ORTHO05D002376 8.9e-36 154.8 157 45.9
SGA_v2.0_scaffold59G20735 Striga asiatica HOM05D010852 ORTHO05D002376 1.2e-35 154.5 157 46.5
SGA_v2.0_scaffold56G19931 Striga asiatica HOM05D010852 ORTHO05D002376 6.4e-34 148.7 170 42.4
SGA_v2.0_scaffold250G44995 Striga asiatica HOM05D010852 ORTHO05D002376 1.3e-26 124.4 123 43.1
SGA_v2.0_scaffold26G11253 Striga asiatica HOM05D010852 ORTHO05D002376 4.3e-22 109.4 185 35.7
SGA_v2.0_scaffold221G42656 Striga asiatica HOM05D010852 ORTHO05D002376 1.6e-21 107.5 211 32.2
SGA_v2.0_scaffold49G18177 Striga asiatica HOM05D010852 ORTHO05D002376 2.1e-21 107.1 144 36.1
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-13 79.3 161 29.8
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 6.2e-13 79.0 161 30.4
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.1e-13 78.6 145 29.0
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 1.8e-12 77.4 114 33.3
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-12 77.0 159 30.8
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.0e-12 76.3 138 30.4
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 6.8e-12 75.5 139 30.9
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 8.9e-12 75.1 159 30.8
SGA_v2.0_scaffold167G38409 Striga asiatica HOM05D010852 ORTHO05D002376 1.2e-11 74.7 173 27.2
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-11 74.3 141 29.8
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-11 74.3 141 29.8
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.0e-11 73.9 132 29.5
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 2.6e-11 73.6 139 31.7
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 2.6e-11 73.6 140 34.3
SGA_v2.0_scaffold82G26258 Striga asiatica HOM05D010852 ORTHO05D002376 3.4e-11 73.2 63 49.2
Nitab4.5_0000305g0130 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.4e-10 68.6 140 27.1
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 1.1e-09 68.2 144 26.4
arahy.Tifrunner.gnm1.ann1.G9S7AV Arachis hypogaea HOM05D002441 ORTHO05D002376 1.9e-09 67.4 137 29.9
arahy.Tifrunner.gnm1.ann1.6U7VQG Arachis hypogaea HOM05D002441 ORTHO05D002376 3.2e-09 66.6 152 26.3
arahy.Tifrunner.gnm1.ann1.F76963 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.2e-09 66.6 166 27.7
CAN.G764.9 Capsicum annuum HOM05D002441 ORTHO05D002376 3.5e-08 63.2 108 29.6
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 4.6e-08 62.8 147 32.0
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 6.0e-08 62.4 138 29.7
Carub.0004s2878 Capsella rubella HOM05D000305 ORTHO05D000065 7.8e-08 62.0 118 33.1
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 5.1e-07 59.3 140 28.6
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 8.6e-07 58.5 109 33.0
DCAR_031299 Daucus carota HOM05D000001 ORTHO05D000003 1.5e-06 57.8 109 32.1
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 1.5e-06 57.8 109 29.4
Carub.0001s3517 Capsella rubella HOM05D000353 ORTHO05D000174 1.9e-06 57.4 109 29.4
DCAR_011057 Daucus carota HOM05D002907 ORTHO05D000065 2.5e-06 57.0 109 32.1
Nitab4.5_0003378g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.5e-06 57.0 151 23.8
BolC8t50705H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-06 56.6 141 29.1
DCAR_025606 Daucus carota HOM05D012849 ORTHO05D000065 3.3e-06 56.6 138 30.4
RcHm_v2.0_Chr7g0206181 Rosa chinensis HOM05D006849 ORTHO05D003348 9.6e-06 55.1 113 31.9


User provided reference genes

Program Settings