Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 2.4e-97 359.0 206 100.0
SGA_v2.0_scaffold90G27801 Striga asiatica HOM05D000069 ORTHO05D399115 3.7e-29 132.5 191 55.0
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 3.5e-27 125.9 182 59.9
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 1.2e-19 100.9 183 42.6
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 4.6e-19 99.0 183 39.9
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 1.0e-18 97.8 180 43.3
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 3.0e-18 96.3 74 73.0
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 8.6e-18 94.7 74 68.9
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 1.1e-17 94.4 74 71.6
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 2.5e-17 93.2 74 68.9
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 3.3e-17 92.8 74 68.9
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 3.3e-17 92.8 74 70.3
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 4.3e-17 92.4 74 68.9
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 7.3e-17 91.7 74 68.9
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 7.3e-17 91.7 74 68.9
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 7.3e-17 91.7 179 43.0
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 7.3e-17 91.7 173 41.0
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 9.5e-17 91.3 185 42.7
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.2e-16 90.9 167 40.1
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.2e-16 90.9 74 68.9
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 2.1e-16 90.1 173 41.0
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.1e-16 90.1 74 70.3
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 2.8e-16 89.7 160 53.8
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 2.8e-16 89.7 74 67.6
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 2.8e-16 89.7 177 40.7
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 3.6e-16 89.4 74 66.2
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 4.7e-16 89.0 180 40.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 6.2e-16 88.6 172 40.1
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 6.2e-16 88.6 74 64.9
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 8.0e-16 88.2 74 67.6
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 8.0e-16 88.2 74 64.9
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 8.0e-16 88.2 168 41.7
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.1e-15 87.8 74 66.2
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 1.8e-15 87.0 74 66.2
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 2.3e-15 86.7 74 63.5
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.1e-15 86.3 174 37.9
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 3.1e-15 86.3 174 37.9
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 4.0e-15 85.9 74 63.5
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 4.0e-15 85.9 74 66.2
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 5.2e-15 85.5 74 63.5
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 6.8e-15 85.1 74 66.2
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 6.8e-15 85.1 74 63.5
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 6.8e-15 85.1 74 64.9
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.2e-14 84.3 74 62.2
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 1.5e-14 84.0 74 64.9
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.5e-14 84.0 74 64.9
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.5e-14 84.0 74 64.9
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 2.0e-14 83.6 188 39.4
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 2.6e-14 83.2 179 38.5
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 63.5
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 63.5
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 63.5
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 63.5
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 63.5
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 63.5
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 4.4e-14 82.4 170 40.0
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 4.4e-14 82.4 74 60.8
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 5.8e-14 82.0 74 62.2
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 5.8e-14 82.0 188 36.7
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 7.5e-14 81.6 74 62.2
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.7e-13 80.5 167 40.1
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 2.2e-13 80.1 75 62.7
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.2e-13 80.1 171 39.8
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 6.4e-13 78.6 74 63.5
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 8.3e-13 78.2 164 48.2
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.1e-12 77.8 72 61.1
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.1e-12 77.8 72 61.1
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 1.4e-12 77.4 74 59.5
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.4e-12 77.4 72 62.5
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 3.2e-12 76.3 168 40.5
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 5.4e-12 75.5 74 60.8
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 9.2e-12 74.7 185 37.3
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.2e-11 74.3 176 36.9
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 3.5e-11 72.8 74 59.5
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 6.0e-11 72.0 74 55.4
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 6.0e-11 72.0 74 55.4
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.0e-10 71.2 181 34.8
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.3e-10 70.1 162 39.5
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 8.6e-10 68.2 74 52.7
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.5e-09 67.4 81 51.9
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 5.6e-09 65.5 53 66.0
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 1.6e-08 63.9 39 79.5
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 8.1e-08 61.6 59 59.3
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 1.8e-07 60.5 182 35.2
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 5.2e-07 58.9 90 44.4
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 5.2e-07 58.9 86 46.5
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 8.9e-07 58.2 84 46.4
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 8.9e-07 58.2 173 32.9
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 2.0e-06 57.0 74 51.4
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 3.4e-06 56.2 32 84.4
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 3.4e-06 56.2 188 33.0
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 3.4e-06 56.2 32 84.4
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 3.4e-06 56.2 32 84.4
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 5.8e-06 55.5 168 39.3
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 7.5e-06 55.1 69 53.6


User provided reference genes

Program Settings