Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 7.5e-136 487.3 261 100.0
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.0e-76 290.8 266 62.0
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 6.1e-69 265.0 257 57.2
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.4e-68 263.8 241 59.8
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.3e-68 263.1 231 58.4
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 6.7e-68 261.5 218 65.1
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.0e-67 260.0 230 62.2
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.6e-67 259.6 217 62.7
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 3.3e-67 259.2 218 61.5
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 3.3e-67 259.2 204 65.7
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 4.4e-67 258.8 220 63.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 5.7e-67 258.5 227 61.7
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 5.7e-67 258.5 230 59.6
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 5.7e-67 258.5 231 59.7
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 5.7e-67 258.5 204 65.2
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 1.3e-66 257.3 241 56.8
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 2.2e-66 256.5 216 61.6
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.8e-66 256.1 217 61.8
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.8e-66 256.1 231 57.1
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 3.7e-66 255.8 216 62.0
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 3.7e-66 255.8 214 64.5
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 6.3e-66 255.0 204 64.2
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 8.2e-66 254.6 216 61.6
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 8.2e-66 254.6 240 58.8
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.4e-65 253.8 226 60.2
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 1.8e-65 253.4 273 52.4
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 2.4e-65 253.1 191 67.0
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 2.4e-65 253.1 247 55.5
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.4e-65 253.1 227 61.2
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 5.3e-65 251.9 219 60.3
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 9.1e-65 251.1 182 70.3
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.2e-64 250.8 255 53.7
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.6e-64 250.4 226 58.8
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.6e-64 250.4 249 56.2
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 2.0e-64 250.0 242 57.9
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 2.6e-64 249.6 243 57.2
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 2.6e-64 249.6 221 59.7
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 2.6e-64 249.6 243 53.9
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.6e-64 249.6 217 60.4
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 3.5e-64 249.2 217 60.4
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.5e-64 249.2 251 53.8
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 3.5e-64 249.2 232 57.8
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 5.9e-64 248.4 216 60.2
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 5.9e-64 248.4 216 62.0
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 5.9e-64 248.4 222 59.9
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 7.7e-64 248.1 251 53.4
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.0e-63 247.7 226 58.8
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 3.8e-63 245.7 219 58.4
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 5.0e-63 245.4 256 53.5
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-62 244.2 251 52.6
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 1.9e-62 243.4 245 52.2
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.5e-62 243.0 263 52.9
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.5e-62 243.0 220 58.2
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 5.5e-62 241.9 233 55.8
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 5.5e-62 241.9 233 55.8
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 7.2e-62 241.5 217 59.0
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 7.2e-62 241.5 220 57.3
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.2e-61 240.7 217 58.5
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 1.2e-61 240.7 216 58.8
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.7e-61 239.6 268 52.2
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 2.7e-61 239.6 221 58.8
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 3.6e-61 239.2 216 60.6
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 3.6e-61 239.2 224 57.6
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 4.7e-61 238.8 215 58.6
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 2.3e-60 236.5 241 52.3
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 2.3e-60 236.5 218 56.4
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 8.8e-60 234.6 219 55.3
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 1.5e-59 233.8 271 50.9
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.5e-59 233.8 221 56.1
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 4.4e-59 232.3 218 55.0
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 4.4e-59 232.3 232 54.3
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 5.7e-59 231.9 184 63.0
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.7e-58 230.3 221 54.8
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 1.7e-58 230.3 217 54.8
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 2.2e-58 229.9 219 54.8
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 2.2e-58 229.9 231 54.5
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 2.2e-58 229.9 169 66.3
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 2.8e-58 229.6 216 57.4
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 3.7e-58 229.2 235 51.9
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 3.7e-58 229.2 236 54.2
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 3.7e-58 229.2 231 54.5
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 4.8e-58 228.8 205 56.6
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 8.2e-58 228.0 174 65.5
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 2.4e-57 226.5 223 54.3
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 4.1e-57 225.7 218 55.5
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 4.1e-57 225.7 226 53.5
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 7.0e-57 224.9 193 59.6
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 2.0e-56 223.4 230 51.7
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.0e-56 223.4 221 56.6
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.5e-56 222.6 254 51.2
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 6.5e-55 218.4 225 52.9
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.9e-54 216.9 219 51.1
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 4.2e-54 215.7 216 53.2
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.6e-53 213.8 204 55.4
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.6e-53 213.8 204 55.4
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 4.4e-51 205.7 199 55.3
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 2.8e-50 203.0 240 48.8
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.3e-50 201.8 202 53.0
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 2.7e-48 196.4 152 66.4
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 2.2e-47 193.4 268 44.8
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 1.5e-46 190.7 152 64.5
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.5e-43 180.6 177 54.8
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 7.5e-43 178.3 204 49.5
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 5.2e-36 155.6 114 71.1
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 5.7e-35 152.1 139 56.1
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 3.2e-33 146.4 173 48.0
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.6e-32 144.1 173 42.8
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 3.0e-31 139.8 206 37.9
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 3.9e-31 139.4 188 39.4
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.6e-31 138.7 208 43.3
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.5e-27 127.5 141 51.1
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 2.0e-27 127.1 126 54.8
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 3.4e-27 126.3 188 36.2
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 1.7e-26 124.0 88 70.5
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.7e-26 122.9 129 51.2
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 3.2e-25 119.8 96 62.5
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 7.8e-24 115.2 137 52.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 1.2e-13 81.3 48 72.9
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 3.8e-10 69.7 188 26.6
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.5e-06 57.0 35 77.1


User provided reference genes

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