Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 5.1e-198 694.1 330 100.0
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 3.7e-156 555.1 323 79.6
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.0e-153 547.0 326 77.9
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.3e-153 546.6 327 78.9
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 1.7e-153 546.2 320 78.8
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 2.9e-153 545.4 329 76.6
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 8.6e-153 543.9 329 75.7
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 8.6e-153 543.9 330 76.7
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 4.3e-152 541.6 324 76.2
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.8e-151 538.9 326 76.1
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.8e-151 538.9 322 77.0
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 3.6e-151 538.5 329 77.8
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 3.6e-151 538.5 324 75.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.0e-150 537.0 325 77.8
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.4e-150 536.6 325 77.2
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 1.4e-150 536.6 324 76.2
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 4.0e-150 535.0 325 77.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 7.5e-149 530.8 326 74.8
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.3e-148 530.0 322 77.6
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 2.9e-148 528.9 326 75.2
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 9.2e-147 523.9 325 74.2
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 3.5e-146 521.9 327 74.0
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 6.0e-146 521.2 324 74.4
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 7.8e-146 520.8 330 75.5
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.6e-143 513.1 288 82.3
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.1e-142 510.4 328 73.5
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 2.3e-142 509.2 288 80.2
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 8.9e-142 507.3 330 72.4
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.3e-140 503.4 316 71.5
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 8.3e-140 500.7 316 71.5
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 4.1e-139 498.4 318 70.4
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 5.4e-139 498.0 318 70.4
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 9.2e-139 497.3 318 70.1
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 5.1e-137 491.5 330 71.8
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 1.6e-135 486.5 330 71.2
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 1.4e-134 483.4 324 70.1
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 8.9e-134 480.7 318 69.5
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 5.8e-133 478.0 324 69.1
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 7.5e-133 477.6 325 68.3
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 7.5e-133 477.6 325 68.0
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 1.4e-131 473.4 324 69.8
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 1.3e-129 466.8 324 68.8
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.0e-129 465.7 335 66.6
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 8.6e-129 464.2 318 67.0
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 1.9e-128 463.0 326 67.5
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 1.9e-128 463.0 325 66.8
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.5e-128 462.6 324 68.2
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 3.3e-128 462.2 324 68.2
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 3.3e-128 462.2 325 67.4
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 9.5e-128 460.7 327 67.6
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 9.5e-128 460.7 327 67.3
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.6e-127 459.9 324 68.2
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.1e-127 459.5 330 67.0
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.1e-127 459.5 328 67.4
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.8e-127 459.1 324 67.9
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 2.8e-127 459.1 323 67.5
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 2.8e-127 459.1 325 66.8
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 8.1e-127 457.6 282 72.3
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.1e-126 457.2 325 67.1
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.8e-126 456.4 324 67.3
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 4.0e-126 455.3 330 66.7
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 6.8e-126 454.5 324 67.0
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 6.8e-126 454.5 322 68.0
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.2e-125 453.8 325 66.5
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.0e-125 453.0 324 67.0
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-125 453.0 325 66.5
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 2.6e-125 452.6 324 65.7
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.8e-125 451.4 324 63.9
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.3e-124 450.3 324 65.4
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 2.9e-124 449.1 325 65.8
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.9e-124 449.1 252 81.0
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 4.9e-124 448.4 324 67.3
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 8.4e-124 447.6 324 66.4
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 8.4e-124 447.6 325 65.2
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.1e-123 447.2 330 64.8
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 2.4e-123 446.0 324 64.8
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 7.1e-123 444.5 322 65.2
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 2.1e-122 443.0 330 65.5
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 2.1e-122 443.0 324 64.8
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 6.0e-122 441.4 370 58.4
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.3e-121 440.3 324 66.0
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.7e-121 439.9 325 66.5
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 8.7e-121 437.6 258 79.8
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.9e-120 436.4 324 63.9
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 6.2e-119 431.4 325 60.3
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.5e-117 426.8 328 61.9
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 7.6e-117 424.5 317 62.5
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 2.4e-115 419.5 324 61.1
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.2e-115 419.1 324 60.8
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 7.1e-115 417.9 324 60.2
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.3e-115 417.5 324 60.5
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.2e-114 417.2 324 60.2
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 7.8e-114 414.5 241 78.4
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.0e-113 414.1 316 61.4
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 7.3e-112 407.9 320 60.9
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 9.6e-112 407.5 244 79.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.0e-110 402.1 322 58.4
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.1e-104 384.0 307 59.6
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 2.0e-101 373.2 324 57.7
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 2.5e-96 356.3 324 52.2
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.1e-95 353.2 328 52.1
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.7e-92 343.6 263 63.5
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.9e-91 340.1 258 64.7
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 5.1e-89 332.0 224 68.8
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 4.3e-88 328.9 278 61.5
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 2.0e-85 320.1 375 42.7
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 3.6e-82 309.3 250 60.8
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 3.6e-74 282.7 247 55.9
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.7e-68 263.8 330 39.4
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 2.3e-65 253.4 251 49.4
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.0e-57 228.0 138 76.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 5.2e-57 225.7 188 55.9
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.0e-56 223.8 191 57.1
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.7e-50 202.6 124 74.2
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 3.0e-49 199.9 126 73.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.8e-41 172.2 94 83.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-24 116.3 149 44.3
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.7e-21 107.1 104 49.0
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 5.1e-20 102.8 87 65.5
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 1.1e-17 95.1 84 50.0
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.4e-08 63.2 50 60.0
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 3.8e-07 60.1 88 42.0
AUR62005585 Chenopodium quinoa HOM05D002893 ORTHO05D003387 1.4e-06 58.2 109 33.9
AUR62024145 Chenopodium quinoa HOM05D002893 ORTHO05D003387 1.4e-06 58.2 109 33.9
SGA_v2.0_scaffold87G27135 Striga asiatica HOM05D002893 ORTHO05D008562 2.4e-06 57.4 110 34.5
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 4.2e-06 56.6 49 59.2
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 5.4e-06 56.2 43 65.1
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 5.4e-06 56.2 49 57.1
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 7.1e-06 55.8 49 59.2


User provided reference genes

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