Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 0.0e+00 1356.7 693 100.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.0e-110 405.2 353 64.6
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.5e-106 391.3 346 63.6
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.1e-101 375.2 358 58.7
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 5.5e-101 372.9 374 57.0
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 7.2e-101 372.5 354 60.7
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 4.7e-100 369.8 359 58.8
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 7.9e-100 369.0 367 58.0
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.1e-98 365.2 362 56.4
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.5e-98 364.8 354 57.3
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.5e-98 364.8 386 54.4
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 3.3e-98 363.6 353 58.1
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 4.4e-98 363.2 352 56.2
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 5.7e-98 362.8 355 57.5
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 2.2e-97 360.9 354 57.1
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.8e-97 360.5 355 58.9
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 3.7e-97 360.1 357 57.1
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 3.7e-97 360.1 366 56.3
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 3.7e-97 360.1 366 56.6
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 6.3e-97 359.4 356 57.3
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 8.2e-97 359.0 353 56.9
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.1e-96 358.6 358 56.4
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.1e-96 358.6 365 59.2
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.4e-96 358.2 356 57.0
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 3.1e-96 357.1 354 57.3
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 4.1e-96 356.7 354 55.1
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 4.1e-96 356.7 353 56.7
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 7.0e-96 355.9 356 55.6
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 9.1e-96 355.5 353 56.4
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 9.1e-96 355.5 354 55.4
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 9.1e-96 355.5 359 56.3
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.2e-95 355.1 423 51.5
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.5e-95 354.8 375 56.3
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 2.6e-95 354.0 354 56.5
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 4.5e-95 353.2 354 56.8
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 5.9e-95 352.8 356 56.7
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.0e-94 352.1 353 56.7
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.3e-94 351.7 354 56.5
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.3e-94 351.7 356 55.9
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.9e-94 350.5 350 57.1
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 5.0e-94 349.7 354 56.2
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 5.0e-94 349.7 354 54.5
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 5.0e-94 349.7 354 55.4
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 8.5e-94 349.0 354 54.5
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.1e-93 348.6 350 56.0
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.1e-93 348.6 354 54.8
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.9e-93 347.8 350 55.4
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 2.5e-93 347.4 352 55.7
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 7.2e-93 345.9 350 56.0
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 3.6e-92 343.6 358 53.9
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 3.6e-92 343.6 352 56.8
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 3.6e-92 343.6 365 54.5
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 6.1e-92 342.8 346 56.1
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 6.1e-92 342.8 354 54.2
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.0e-91 342.0 358 55.3
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.0e-91 342.0 352 54.5
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 1.4e-91 341.7 351 54.7
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 1.4e-91 341.7 349 54.4
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.8e-91 341.3 351 54.7
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.8e-91 341.3 359 54.6
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.3e-91 340.9 351 54.1
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 2.3e-91 340.9 356 55.6
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 3.0e-91 340.5 358 54.7
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 6.7e-91 339.3 353 54.1
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.8e-91 339.0 349 54.7
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.1e-90 338.6 350 54.6
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 1.5e-90 338.2 354 55.4
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.6e-90 337.4 347 54.8
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.6e-90 337.4 347 54.8
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 5.7e-90 336.3 446 47.1
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 1.3e-89 335.1 349 53.6
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.3e-89 335.1 354 54.0
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.2e-89 334.3 358 54.2
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 3.7e-89 333.6 352 54.0
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 4.8e-89 333.2 356 52.8
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 6.3e-89 332.8 358 55.0
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.4e-88 330.9 347 54.2
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 9.1e-88 328.9 352 52.8
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.2e-87 328.6 355 53.2
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.2e-87 328.6 368 52.7
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.6e-87 327.4 354 53.1
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 3.5e-87 327.0 350 53.1
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 2.9e-86 323.9 356 51.7
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.1e-85 322.0 352 53.1
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 3.2e-85 320.5 367 52.3
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 2.1e-84 317.8 345 54.2
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 3.6e-84 317.0 357 51.3
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.0e-83 315.5 356 52.2
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.8e-83 314.7 357 51.0
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 2.6e-82 310.8 353 52.1
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.4e-82 310.5 353 51.8
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 1.3e-81 308.5 331 52.3
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.7e-81 308.1 331 52.3
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 7.0e-80 302.8 385 47.8
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.2e-79 302.0 352 50.9
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 2.7e-79 300.8 334 51.5
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 2.5e-77 294.3 346 52.3
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.0e-75 288.9 356 50.6
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.4e-72 278.5 348 50.0
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 3.8e-70 270.4 354 45.2
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 1.0e-67 262.3 294 52.7
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 4.6e-63 246.9 329 46.2
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 1.7e-62 245.0 294 50.3
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.7e-57 228.4 285 46.3
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 5.4e-56 223.4 280 46.8
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.6e-55 221.9 364 39.8
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 8.6e-54 216.1 370 39.5
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.1e-53 215.7 276 46.7
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 1.3e-49 202.2 181 60.2
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.4e-48 198.7 363 36.4
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 7.8e-47 193.0 158 65.8
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 5.1e-46 190.3 128 76.6
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 4.6e-39 167.2 123 68.3
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.9e-37 161.8 487 28.7
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 6.2e-20 103.6 60 81.7
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 5.8e-18 97.1 74 64.9
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 2.8e-12 78.2 315 22.5
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 6.2e-12 77.0 51 80.4
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 8.1e-12 76.6 49 71.4
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 2.4e-11 75.1 49 67.3
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.5e-10 72.4 44 72.7
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 5.1e-06 57.4 118 30.5


User provided reference genes

Program Settings