Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.2e-172 609.8 311 100.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 4.9e-134 481.5 316 78.8
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 6.9e-128 461.1 317 75.4
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 3.5e-124 448.7 319 72.7
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 5.1e-123 444.9 311 74.3
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.1e-122 443.7 320 71.9
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.3e-121 440.3 318 72.0
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 6.2e-121 438.0 320 71.6
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 6.9e-120 434.5 311 70.7
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 6.9e-120 434.5 311 70.7
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 9.0e-120 434.1 316 70.9
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.7e-118 429.9 324 68.8
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 2.9e-118 429.1 324 68.5
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.9e-118 429.1 321 69.5
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.1e-117 427.2 312 69.6
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 4.2e-117 425.2 324 68.5
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.3e-115 420.2 317 67.8
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 6.7e-115 417.9 311 66.6
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.7e-115 417.5 312 69.9
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 1.9e-114 416.4 312 69.9
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.3e-114 415.6 312 69.6
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 5.7e-114 414.8 311 67.2
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 7.4e-114 414.5 311 66.9
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 7.4e-114 414.5 311 65.9
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 9.7e-114 414.1 311 67.2
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.3e-113 413.7 313 67.4
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.8e-113 412.5 311 65.6
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 2.8e-113 412.5 309 68.0
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.7e-113 412.1 311 65.6
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.4e-112 410.2 311 66.6
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.8e-112 409.8 312 67.0
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.8e-112 409.8 311 67.5
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.8e-112 409.8 312 66.7
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.1e-112 408.7 312 69.2
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 5.3e-112 408.3 312 67.0
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 9.0e-112 407.5 311 64.3
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 9.0e-112 407.5 302 66.9
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.2e-111 407.1 311 66.9
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.2e-111 407.1 308 66.6
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.5e-111 406.8 311 66.9
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 3.4e-111 405.6 313 67.7
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.7e-110 403.3 310 69.0
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.2e-110 402.9 298 68.5
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.9e-110 402.5 312 66.7
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 3.8e-110 402.1 311 65.6
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 5.0e-110 401.7 304 68.1
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 8.5e-110 401.0 310 66.5
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 8.5e-110 401.0 311 66.6
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 2.5e-109 399.4 303 66.7
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 2.5e-109 399.4 296 68.9
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.2e-109 399.1 313 66.5
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.5e-109 398.3 310 65.8
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 1.2e-108 397.1 315 64.4
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.1e-108 396.4 311 65.3
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 3.6e-108 395.6 311 65.9
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.6e-108 395.6 313 65.8
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 4.6e-108 395.2 312 64.7
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 4.6e-108 395.2 312 65.4
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 7.9e-108 394.4 372 57.0
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.4e-107 393.7 318 64.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 5.1e-107 391.7 310 66.1
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 5.1e-107 391.7 308 65.6
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 8.8e-107 391.0 310 63.5
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.5e-106 390.2 293 68.9
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.5e-106 389.4 313 64.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 3.3e-106 389.0 311 65.6
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 3.3e-106 389.0 308 65.6
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 7.4e-106 387.9 311 65.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 9.7e-106 387.5 310 62.9
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.3e-105 387.1 311 65.0
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.7e-105 386.7 314 67.5
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.7e-105 386.7 294 67.0
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.7e-105 386.7 311 65.0
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 2.2e-105 386.3 311 65.3
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 2.2e-105 386.3 311 65.3
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 6.3e-105 384.8 313 64.2
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 1.8e-104 383.3 311 65.0
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 5.3e-104 381.7 310 63.5
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 6.9e-104 381.3 310 64.5
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.2e-103 380.6 294 66.0
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.0e-103 379.8 311 62.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 2.0e-103 379.8 314 64.3
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 3.4e-103 379.0 311 64.0
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 5.9e-103 378.3 309 63.1
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 7.7e-103 377.9 310 63.5
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 2.2e-102 376.3 312 61.2
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 4.2e-101 372.1 296 65.5
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 9.4e-101 370.9 296 66.6
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 5.1e-99 365.2 296 65.9
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.1e-99 365.2 311 60.8
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 3.3e-98 362.5 311 60.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 6.3e-97 358.2 291 62.5
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 8.2e-97 357.8 311 59.8
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.1e-96 355.5 301 63.5
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 4.5e-95 352.1 465 45.6
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 3.8e-94 349.0 311 60.5
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 8.5e-94 347.8 293 62.1
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.7e-92 342.8 263 66.9
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 3.0e-91 339.3 315 60.3
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.5e-90 337.0 274 63.9
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 3.7e-89 332.4 272 64.3
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.7e-89 332.4 292 58.6
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.4e-88 330.5 292 58.9
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 2.2e-86 323.2 303 59.7
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 1.6e-84 317.0 308 57.8
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.8e-80 303.5 303 53.1
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.0e-78 297.7 218 68.8
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 6.5e-78 295.0 229 65.9
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.5e-77 293.1 218 66.5
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.1e-76 290.0 275 56.0
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 5.2e-75 285.4 305 51.8
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.5e-74 283.9 310 51.6
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.8e-73 279.6 310 51.0
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 2.3e-70 270.0 291 51.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 7.2e-69 265.0 289 50.5
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 3.6e-68 262.7 167 75.4
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 1.8e-67 260.4 290 48.3
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.8e-67 260.4 285 49.8
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.3e-67 260.0 169 76.3
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 4.4e-66 255.8 292 46.6
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 4.9e-65 252.3 287 48.1
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 8.3e-65 251.5 169 74.6
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-60 236.5 268 53.0
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 8.9e-59 231.5 290 46.6
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 8.3e-57 224.9 167 70.7
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.6e-55 220.7 290 45.2
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 3.6e-52 209.5 267 50.2
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 5.8e-50 202.2 261 48.7
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 4.6e-47 192.6 133 73.7
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.1e-39 167.2 116 70.7
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.4e-32 143.7 156 54.5
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 5.8e-26 122.5 130 53.8
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 7.1e-16 89.0 79 58.2
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 9.6e-13 78.6 258 34.5
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 3.8e-09 66.6 179 38.5


User provided reference genes

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